Atlas of Genetics and Cytogenetics in Oncology and Haematology


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DPYD-AS1 (DPYD antisense RNA 1)

Identity

Alias_namesDPYD antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) DPYD-AS1
LocusID (NCBI) 100873932
Atlas_Id 62631
Location 1p21.3  [Link to chromosome band 1p21]
Location_base_pair Starts at 97095923 and ends at 97322955 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DPYD-AS1   40195
Cards
Entrez_Gene (NCBI)DPYD-AS1  100873932  DPYD antisense RNA 1
Aliases
GeneCards (Weizmann)DPYD-AS1
Ensembl hg19 (Hinxton)ENSG00000232878 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232878 [Gene_View]  chr1:97095923-97322955 [Contig_View]  DPYD-AS1 [Vega]
ICGC DataPortalENSG00000232878
TCGA cBioPortalDPYD-AS1
AceView (NCBI)DPYD-AS1
Genatlas (Paris)DPYD-AS1
WikiGenes100873932
SOURCE (Princeton)DPYD-AS1
Genetics Home Reference (NIH)DPYD-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)DPYD-AS1  -     chr1:97095923-97322955 +  1p21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DPYD-AS1  -     1p21.3   [Description]    (hg19-Feb_2009)
EnsemblDPYD-AS1 - 1p21.3 [CytoView hg19]  DPYD-AS1 - 1p21.3 [CytoView hg38]
Mapping of homologs : NCBIDPYD-AS1 [Mapview hg19]  DPYD-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CF529923
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DPYD-AS1
Cluster EST : UnigeneHs.682651 [ NCBI ]
CGAP (NCI)Hs.682651
Alternative Splicing GalleryENSG00000232878
Gene ExpressionDPYD-AS1 [ NCBI-GEO ]   DPYD-AS1 [ EBI - ARRAY_EXPRESS ]   DPYD-AS1 [ SEEK ]   DPYD-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)DPYD-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100873932
GTEX Portal (Tissue expression)DPYD-AS1
Human Protein AtlasENSG00000232878-DPYD-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DPYD-AS1
DMDM Disease mutations100873932
Blocks (Seattle)DPYD-AS1
Human Protein Atlas [tissue]ENSG00000232878-DPYD-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000232878
BioGRIDDPYD-AS1
STRING (EMBL)DPYD-AS1
ZODIACDPYD-AS1
Ontologies - Pathways
Huge Navigator DPYD-AS1 [HugePedia]
snp3D : Map Gene to Disease100873932
BioCentury BCIQDPYD-AS1
ClinGenDPYD-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100873932
Clinical trialDPYD-AS1
Miscellaneous
canSAR (ICR)DPYD-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineDPYD-AS1
EVEXDPYD-AS1
GoPubMedDPYD-AS1
iHOPDPYD-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:45:08 CET 2017

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