Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

DPYD-AS2 (DPYD antisense RNA 2)

Identity

Alias_namesDPYD antisense RNA 2 (non-protein coding)
Other alias-
HGNC (Hugo) DPYD-AS2
LocusID (NCBI) 100873933
Atlas_Id 62632
Location 1p21.3  [Link to chromosome band 1p21]
Location_base_pair Starts at 97796921 and ends at 97798051 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DPYD-AS2   40196
Cards
Entrez_Gene (NCBI)DPYD-AS2  100873933  DPYD antisense RNA 2
Aliases
GeneCards (Weizmann)DPYD-AS2
Ensembl hg19 (Hinxton)ENSG00000235777 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235777 [Gene_View]  chr1:97796921-97798051 [Contig_View]  DPYD-AS2 [Vega]
ICGC DataPortalENSG00000235777
TCGA cBioPortalDPYD-AS2
AceView (NCBI)DPYD-AS2
Genatlas (Paris)DPYD-AS2
WikiGenes100873933
SOURCE (Princeton)DPYD-AS2
Genetics Home Reference (NIH)DPYD-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)DPYD-AS2  -     chr1:97796921-97798051 +  1p21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DPYD-AS2  -     1p21.3   [Description]    (hg19-Feb_2009)
EnsemblDPYD-AS2 - 1p21.3 [CytoView hg19]  DPYD-AS2 - 1p21.3 [CytoView hg38]
Mapping of homologs : NCBIDPYD-AS2 [Mapview hg19]  DPYD-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BU569038
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DPYD-AS2
Cluster EST : UnigeneHs.568669 [ NCBI ]
CGAP (NCI)Hs.568669
Alternative Splicing GalleryENSG00000235777
Gene ExpressionDPYD-AS2 [ NCBI-GEO ]   DPYD-AS2 [ EBI - ARRAY_EXPRESS ]   DPYD-AS2 [ SEEK ]   DPYD-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)DPYD-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100873933
GTEX Portal (Tissue expression)DPYD-AS2
Human Protein AtlasENSG00000235777-DPYD-AS2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DPYD-AS2
DMDM Disease mutations100873933
Blocks (Seattle)DPYD-AS2
Human Protein Atlas [tissue]ENSG00000235777-DPYD-AS2 [tissue]
Protein Interaction databases
FunCoupENSG00000235777
BioGRIDDPYD-AS2
STRING (EMBL)DPYD-AS2
ZODIACDPYD-AS2
Ontologies - Pathways
Huge Navigator DPYD-AS2 [HugePedia]
snp3D : Map Gene to Disease100873933
BioCentury BCIQDPYD-AS2
ClinGenDPYD-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100873933
Clinical trialDPYD-AS2
Miscellaneous
canSAR (ICR)DPYD-AS2 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDPYD-AS2
EVEXDPYD-AS2
GoPubMedDPYD-AS2
iHOPDPYD-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:45:08 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.