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DQX1 (DEAQ-box RNA dependent ATPase 1)

Identity

Alias_namesDEAQ box polypeptide 1 (RNA-dependent ATPase)
Alias_symbol (synonym)FLJ23757
Other alias-
HGNC (Hugo) DQX1
LocusID (NCBI) 165545
Atlas_Id 62634
Location 2p13.1  [Link to chromosome band 2p13]
Location_base_pair Starts at 74518131 and ends at 74526281 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DQX1   20410
Cards
Entrez_Gene (NCBI)DQX1  165545  DEAQ-box RNA dependent ATPase 1
Aliases
GeneCards (Weizmann)DQX1
Ensembl hg19 (Hinxton)ENSG00000144045 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000144045 [Gene_View]  chr2:74518131-74526281 [Contig_View]  DQX1 [Vega]
ICGC DataPortalENSG00000144045
TCGA cBioPortalDQX1
AceView (NCBI)DQX1
Genatlas (Paris)DQX1
WikiGenes165545
SOURCE (Princeton)DQX1
Genetics Home Reference (NIH)DQX1
Genomic and cartography
GoldenPath hg38 (UCSC)DQX1  -     chr2:74518131-74526281 -  2p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DQX1  -     2p13.1   [Description]    (hg19-Feb_2009)
EnsemblDQX1 - 2p13.1 [CytoView hg19]  DQX1 - 2p13.1 [CytoView hg38]
Mapping of homologs : NCBIDQX1 [Mapview hg19]  DQX1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA515987 AK074337 AK092420 BC033238 BC075018
RefSeq transcript (Entrez)NM_133637
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DQX1
Cluster EST : UnigeneHs.191705 [ NCBI ]
CGAP (NCI)Hs.191705
Alternative Splicing GalleryENSG00000144045
Gene ExpressionDQX1 [ NCBI-GEO ]   DQX1 [ EBI - ARRAY_EXPRESS ]   DQX1 [ SEEK ]   DQX1 [ MEM ]
Gene Expression Viewer (FireBrowse)DQX1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)165545
GTEX Portal (Tissue expression)DQX1
Human Protein AtlasENSG00000144045-DQX1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TE96   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TE96  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TE96
Splice isoforms : SwissVarQ8TE96
Catalytic activity : Enzyme3.6.4.12 [ Enzyme-Expasy ]   3.6.4.123.6.4.12 [ IntEnz-EBI ]   3.6.4.12 [ BRENDA ]   3.6.4.12 [ KEGG ]   
PhosPhoSitePlusQ8TE96
Domaine pattern : Prosite (Expaxy)HELICASE_ATP_BIND_1 (PS51192)    HELICASE_CTER (PS51194)   
Domains : Interpro (EBI)DUF1605    Helicase-assoc_dom    Helicase_ATP-bd    Helicase_C    P-loop_NTPase   
Domain families : Pfam (Sanger)HA2 (PF04408)    OB_NTP_bind (PF07717)   
Domain families : Pfam (NCBI)pfam04408    pfam07717   
Domain families : Smart (EMBL)DEXDc (SM00487)  HA2 (SM00847)  
Conserved Domain (NCBI)DQX1
DMDM Disease mutations165545
Blocks (Seattle)DQX1
SuperfamilyQ8TE96
Human Protein Atlas [tissue]ENSG00000144045-DQX1 [tissue]
Peptide AtlasQ8TE96
HPRD13249
IPIIPI00385794   IPI00843897   IPI00844595   IPI00894540   IPI01014763   
Protein Interaction databases
DIP (DOE-UCLA)Q8TE96
IntAct (EBI)Q8TE96
FunCoupENSG00000144045
BioGRIDDQX1
STRING (EMBL)DQX1
ZODIACDQX1
Ontologies - Pathways
QuickGOQ8TE96
Ontology : AmiGOmRNA splicing, via spliceosome  ATP-dependent RNA helicase activity  ATP binding  spliceosomal complex  cytoplasm  
Ontology : EGO-EBImRNA splicing, via spliceosome  ATP-dependent RNA helicase activity  ATP binding  spliceosomal complex  cytoplasm  
NDEx NetworkDQX1
Atlas of Cancer Signalling NetworkDQX1
Wikipedia pathwaysDQX1
Orthology - Evolution
OrthoDB165545
GeneTree (enSembl)ENSG00000144045
Phylogenetic Trees/Animal Genes : TreeFamDQX1
HOVERGENQ8TE96
HOGENOMQ8TE96
Homologs : HomoloGeneDQX1
Homology/Alignments : Family Browser (UCSC)DQX1
Gene fusions - Rearrangements
Fusion: Tumor Portal DQX1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDQX1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DQX1
dbVarDQX1
ClinVarDQX1
1000_GenomesDQX1 
Exome Variant ServerDQX1
ExAC (Exome Aggregation Consortium)ENSG00000144045
GNOMAD BrowserENSG00000144045
Genetic variants : HAPMAP165545
Genomic Variants (DGV)DQX1 [DGVbeta]
DECIPHERDQX1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDQX1 
Mutations
ICGC Data PortalDQX1 
TCGA Data PortalDQX1 
Broad Tumor PortalDQX1
OASIS PortalDQX1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDQX1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDQX1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DQX1
DgiDB (Drug Gene Interaction Database)DQX1
DoCM (Curated mutations)DQX1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DQX1 (select a term)
intoGenDQX1
Cancer3DDQX1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDQX1
Genetic Testing Registry DQX1
NextProtQ8TE96 [Medical]
TSGene165545
GENETestsDQX1
Target ValidationDQX1
Huge Navigator DQX1 [HugePedia]
snp3D : Map Gene to Disease165545
BioCentury BCIQDQX1
ClinGenDQX1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD165545
Chemical/Pharm GKB GenePA134916600
Clinical trialDQX1
Miscellaneous
canSAR (ICR)DQX1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDQX1
EVEXDQX1
GoPubMedDQX1
iHOPDQX1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:45:09 CET 2017

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