Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

DRAP1 (DR1 associated protein 1)

Identity

Alias_symbol (synonym)NC2-alpha
Other alias
HGNC (Hugo) DRAP1
LocusID (NCBI) 10589
Atlas_Id 62636
Location 11q13.1  [Link to chromosome band 11q13]
Location_base_pair Starts at 65919257 and ends at 65921577 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
APOA1 (11q23.3) / DRAP1 (11q13.1)DRAP1 (11q13.1) / ANKRD65 (1p36.33)DRAP1 (11q13.1) / LRRC75A-AS1 (17p11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DRAP1   3019
Cards
Entrez_Gene (NCBI)DRAP1  10589  DR1 associated protein 1
AliasesNC2-alpha
GeneCards (Weizmann)DRAP1
Ensembl hg19 (Hinxton)ENSG00000175550 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000175550 [Gene_View]  chr11:65919257-65921577 [Contig_View]  DRAP1 [Vega]
ICGC DataPortalENSG00000175550
TCGA cBioPortalDRAP1
AceView (NCBI)DRAP1
Genatlas (Paris)DRAP1
WikiGenes10589
SOURCE (Princeton)DRAP1
Genetics Home Reference (NIH)DRAP1
Genomic and cartography
GoldenPath hg38 (UCSC)DRAP1  -     chr11:65919257-65921577 +  11q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DRAP1  -     11q13.1   [Description]    (hg19-Feb_2009)
EnsemblDRAP1 - 11q13.1 [CytoView hg19]  DRAP1 - 11q13.1 [CytoView hg38]
Mapping of homologs : NCBIDRAP1 [Mapview hg19]  DRAP1 [Mapview hg38]
OMIM602289   
Gene and transcription
Genbank (Entrez)BC010025 BG036132 BG719065 BQ773919 EU446936
RefSeq transcript (Entrez)NM_006442
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DRAP1
Cluster EST : UnigeneHs.356742 [ NCBI ]
CGAP (NCI)Hs.356742
Alternative Splicing GalleryENSG00000175550
Gene ExpressionDRAP1 [ NCBI-GEO ]   DRAP1 [ EBI - ARRAY_EXPRESS ]   DRAP1 [ SEEK ]   DRAP1 [ MEM ]
Gene Expression Viewer (FireBrowse)DRAP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10589
GTEX Portal (Tissue expression)DRAP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14919   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14919  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14919
Splice isoforms : SwissVarQ14919
PhosPhoSitePlusQ14919
Domains : Interpro (EBI)CBFA_NFYB_domain    Histone-fold   
Domain families : Pfam (Sanger)CBFD_NFYB_HMF (PF00808)   
Domain families : Pfam (NCBI)pfam00808   
Conserved Domain (NCBI)DRAP1
DMDM Disease mutations10589
Blocks (Seattle)DRAP1
PDB (SRS)1JFI   
PDB (PDBSum)1JFI   
PDB (IMB)1JFI   
PDB (RSDB)1JFI   
Structural Biology KnowledgeBase1JFI   
SCOP (Structural Classification of Proteins)1JFI   
CATH (Classification of proteins structures)1JFI   
SuperfamilyQ14919
Human Protein AtlasENSG00000175550
Peptide AtlasQ14919
HPRD03796
IPIIPI00003084   IPI00980788   IPI00981391   IPI00477494   IPI00980716   
Protein Interaction databases
DIP (DOE-UCLA)Q14919
IntAct (EBI)Q14919
FunCoupENSG00000175550
BioGRIDDRAP1
STRING (EMBL)DRAP1
ZODIACDRAP1
Ontologies - Pathways
QuickGOQ14919
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  DNA binding  transcription factor activity, sequence-specific DNA binding  transcription corepressor activity  protein binding  nucleus  transcription, DNA-templated  identical protein binding  protein heterodimerization activity  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  DNA binding  transcription factor activity, sequence-specific DNA binding  transcription corepressor activity  protein binding  nucleus  transcription, DNA-templated  identical protein binding  protein heterodimerization activity  
NDEx NetworkDRAP1
Atlas of Cancer Signalling NetworkDRAP1
Wikipedia pathwaysDRAP1
Orthology - Evolution
OrthoDB10589
GeneTree (enSembl)ENSG00000175550
Phylogenetic Trees/Animal Genes : TreeFamDRAP1
HOVERGENQ14919
HOGENOMQ14919
Homologs : HomoloGeneDRAP1
Homology/Alignments : Family Browser (UCSC)DRAP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDRAP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DRAP1
dbVarDRAP1
ClinVarDRAP1
1000_GenomesDRAP1 
Exome Variant ServerDRAP1
ExAC (Exome Aggregation Consortium)DRAP1 (select the gene name)
Genetic variants : HAPMAP10589
Genomic Variants (DGV)DRAP1 [DGVbeta]
DECIPHERDRAP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDRAP1 
Mutations
ICGC Data PortalDRAP1 
TCGA Data PortalDRAP1 
Broad Tumor PortalDRAP1
OASIS PortalDRAP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDRAP1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDRAP1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DRAP1
DgiDB (Drug Gene Interaction Database)DRAP1
DoCM (Curated mutations)DRAP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DRAP1 (select a term)
intoGenDRAP1
Cancer3DDRAP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602289   
Orphanet
MedgenDRAP1
Genetic Testing Registry DRAP1
NextProtQ14919 [Medical]
TSGene10589
GENETestsDRAP1
Target ValidationDRAP1
Huge Navigator DRAP1 [HugePedia]
snp3D : Map Gene to Disease10589
BioCentury BCIQDRAP1
ClinGenDRAP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10589
Chemical/Pharm GKB GenePA27476
Clinical trialDRAP1
Miscellaneous
canSAR (ICR)DRAP1 (select the gene name)
Probes
Litterature
PubMed34 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDRAP1
EVEXDRAP1
GoPubMedDRAP1
iHOPDRAP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:46:28 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.