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DRAXIN (dorsal inhibitory axon guidance protein)

Identity

Alias_namesC1orf187
chromosome 1 open reading frame 187
Alias_symbol (synonym)FLJ34999
Draxin
Neucrin
Other aliasAGPA3119
UNQ3119
neucrin
HGNC (Hugo) DRAXIN
LocusID (NCBI) 374946
Atlas_Id 62637
Location 1p36.22  [Link to chromosome band 1p36]
Location_base_pair Starts at 11691724 and ends at 11720279 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
DRAXIN (1p36.22) / AGTRAP (1p36.22)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DRAXIN   25054
Cards
Entrez_Gene (NCBI)DRAXIN  374946  dorsal inhibitory axon guidance protein
AliasesAGPA3119; C1orf187; UNQ3119; neucrin
GeneCards (Weizmann)DRAXIN
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:11691724-11720279 [Contig_View]  DRAXIN [Vega]
TCGA cBioPortalDRAXIN
AceView (NCBI)DRAXIN
Genatlas (Paris)DRAXIN
WikiGenes374946
SOURCE (Princeton)DRAXIN
Genetics Home Reference (NIH)DRAXIN
Genomic and cartography
GoldenPath hg38 (UCSC)DRAXIN  -     chr1:11691724-11720279 +  1p36.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DRAXIN  -     1p36.22   [Description]    (hg19-Feb_2009)
EnsemblDRAXIN - 1p36.22 [CytoView hg19]  DRAXIN - 1p36.22 [CytoView hg38]
Mapping of homologs : NCBIDRAXIN [Mapview hg19]  DRAXIN [Mapview hg38]
OMIM612682   
Gene and transcription
Genbank (Entrez)AB301919 AK075558 AK092318 AK311439 AY358750
RefSeq transcript (Entrez)NM_198545
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DRAXIN
Cluster EST : UnigeneHs.733197 [ NCBI ]
CGAP (NCI)Hs.733197
Gene ExpressionDRAXIN [ NCBI-GEO ]   DRAXIN [ EBI - ARRAY_EXPRESS ]   DRAXIN [ SEEK ]   DRAXIN [ MEM ]
Gene Expression Viewer (FireBrowse)DRAXIN [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)374946
GTEX Portal (Tissue expression)DRAXIN
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NBI3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NBI3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NBI3
Splice isoforms : SwissVarQ8NBI3
PhosPhoSitePlusQ8NBI3
Domains : Interpro (EBI)Draxin   
Domain families : Pfam (Sanger)Draxin (PF15550)   
Domain families : Pfam (NCBI)pfam15550   
Conserved Domain (NCBI)DRAXIN
DMDM Disease mutations374946
Blocks (Seattle)DRAXIN
SuperfamilyQ8NBI3
Peptide AtlasQ8NBI3
HPRD11844
IPIIPI00301098   
Protein Interaction databases
DIP (DOE-UCLA)Q8NBI3
IntAct (EBI)Q8NBI3
BioGRIDDRAXIN
STRING (EMBL)DRAXIN
ZODIACDRAXIN
Ontologies - Pathways
QuickGOQ8NBI3
Ontology : AmiGOprotein binding  extracellular region  extracellular region  axon guidance  axon guidance  Wnt signaling pathway  dorsal spinal cord development  dorsal spinal cord development  commissural neuron differentiation in spinal cord  commissural neuron differentiation in spinal cord  negative regulation of axon extension  forebrain development  forebrain development  negative regulation of neuron apoptotic process  negative regulation of canonical Wnt signaling pathway  negative regulation of canonical Wnt signaling pathway  
Ontology : EGO-EBIprotein binding  extracellular region  extracellular region  axon guidance  axon guidance  Wnt signaling pathway  dorsal spinal cord development  dorsal spinal cord development  commissural neuron differentiation in spinal cord  commissural neuron differentiation in spinal cord  negative regulation of axon extension  forebrain development  forebrain development  negative regulation of neuron apoptotic process  negative regulation of canonical Wnt signaling pathway  negative regulation of canonical Wnt signaling pathway  
NDEx NetworkDRAXIN
Atlas of Cancer Signalling NetworkDRAXIN
Wikipedia pathwaysDRAXIN
Orthology - Evolution
OrthoDB374946
Phylogenetic Trees/Animal Genes : TreeFamDRAXIN
HOVERGENQ8NBI3
HOGENOMQ8NBI3
Homologs : HomoloGeneDRAXIN
Homology/Alignments : Family Browser (UCSC)DRAXIN
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDRAXIN [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DRAXIN
dbVarDRAXIN
ClinVarDRAXIN
1000_GenomesDRAXIN 
Exome Variant ServerDRAXIN
ExAC (Exome Aggregation Consortium)DRAXIN (select the gene name)
Genetic variants : HAPMAP374946
Genomic Variants (DGV)DRAXIN [DGVbeta]
DECIPHERDRAXIN [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDRAXIN 
Mutations
ICGC Data PortalDRAXIN 
TCGA Data PortalDRAXIN 
Broad Tumor PortalDRAXIN
OASIS PortalDRAXIN [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDDRAXIN
BioMutasearch DRAXIN
DgiDB (Drug Gene Interaction Database)DRAXIN
DoCM (Curated mutations)DRAXIN (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DRAXIN (select a term)
intoGenDRAXIN
Cancer3DDRAXIN(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612682   
Orphanet
MedgenDRAXIN
Genetic Testing Registry DRAXIN
NextProtQ8NBI3 [Medical]
TSGene374946
GENETestsDRAXIN
Target ValidationDRAXIN
Huge Navigator DRAXIN [HugePedia]
snp3D : Map Gene to Disease374946
BioCentury BCIQDRAXIN
ClinGenDRAXIN
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD374946
Chemical/Pharm GKB GenePA142672435
Clinical trialDRAXIN
Miscellaneous
canSAR (ICR)DRAXIN (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDRAXIN
EVEXDRAXIN
GoPubMedDRAXIN
iHOPDRAXIN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:46:28 CEST 2017

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