Atlas of Genetics and Cytogenetics in Oncology and Haematology


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DRC7 (dynein regulatory complex subunit 7)

Identity

Alias_namesC16orf50
CCDC135
chromosome 16 open reading frame 50
coiled-coil domain containing 135
Alias_symbol (synonym)DKFZp434I099
FAP50
CFAP50
Other alias
HGNC (Hugo) DRC7
LocusID (NCBI) 84229
Atlas_Id 62639
Location 16q21  [Link to chromosome band 16q21]
Location_base_pair Starts at 57694801 and ends at 57731455 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DRC7   25289
Cards
Entrez_Gene (NCBI)DRC7  84229  dynein regulatory complex subunit 7
AliasesC16orf50; CCDC135; CFAP50; FAP50
GeneCards (Weizmann)DRC7
Ensembl hg19 (Hinxton)ENSG00000159625 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000159625 [Gene_View]  chr16:57694801-57731455 [Contig_View]  DRC7 [Vega]
ICGC DataPortalENSG00000159625
TCGA cBioPortalDRC7
AceView (NCBI)DRC7
Genatlas (Paris)DRC7
WikiGenes84229
SOURCE (Princeton)DRC7
Genetics Home Reference (NIH)DRC7
Genomic and cartography
GoldenPath hg38 (UCSC)DRC7  -     chr16:57694801-57731455 +  16q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DRC7  -     16q21   [Description]    (hg19-Feb_2009)
EnsemblDRC7 - 16q21 [CytoView hg19]  DRC7 - 16q21 [CytoView hg38]
Mapping of homologs : NCBIDRC7 [Mapview hg19]  DRC7 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093035 AK093822 AK292558 AL136907 BC030661
RefSeq transcript (Entrez)NM_001289162 NM_001289163 NM_032269
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DRC7
Cluster EST : UnigeneHs.513635 [ NCBI ]
CGAP (NCI)Hs.513635
Alternative Splicing GalleryENSG00000159625
Gene ExpressionDRC7 [ NCBI-GEO ]   DRC7 [ EBI - ARRAY_EXPRESS ]   DRC7 [ SEEK ]   DRC7 [ MEM ]
Gene Expression Viewer (FireBrowse)DRC7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84229
GTEX Portal (Tissue expression)DRC7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IY82   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IY82  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IY82
Splice isoforms : SwissVarQ8IY82
PhosPhoSitePlusQ8IY82
Domains : Interpro (EBI)DRC7/lobo   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DRC7
DMDM Disease mutations84229
Blocks (Seattle)DRC7
SuperfamilyQ8IY82
Human Protein AtlasENSG00000159625
Peptide AtlasQ8IY82
HPRD10902
IPIIPI00217687   IPI00334796   
Protein Interaction databases
DIP (DOE-UCLA)Q8IY82
IntAct (EBI)Q8IY82
FunCoupENSG00000159625
BioGRIDDRC7
STRING (EMBL)DRC7
ZODIACDRC7
Ontologies - Pathways
QuickGOQ8IY82
Ontology : AmiGOprotein binding  cytoplasm  cytoskeleton  motile cilium  
Ontology : EGO-EBIprotein binding  cytoplasm  cytoskeleton  motile cilium  
NDEx NetworkDRC7
Atlas of Cancer Signalling NetworkDRC7
Wikipedia pathwaysDRC7
Orthology - Evolution
OrthoDB84229
GeneTree (enSembl)ENSG00000159625
Phylogenetic Trees/Animal Genes : TreeFamDRC7
HOVERGENQ8IY82
HOGENOMQ8IY82
Homologs : HomoloGeneDRC7
Homology/Alignments : Family Browser (UCSC)DRC7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDRC7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DRC7
dbVarDRC7
ClinVarDRC7
1000_GenomesDRC7 
Exome Variant ServerDRC7
ExAC (Exome Aggregation Consortium)DRC7 (select the gene name)
Genetic variants : HAPMAP84229
Genomic Variants (DGV)DRC7 [DGVbeta]
DECIPHERDRC7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDRC7 
Mutations
ICGC Data PortalDRC7 
TCGA Data PortalDRC7 
Broad Tumor PortalDRC7
OASIS PortalDRC7 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDDRC7
BioMutasearch DRC7
DgiDB (Drug Gene Interaction Database)DRC7
DoCM (Curated mutations)DRC7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DRC7 (select a term)
intoGenDRC7
Cancer3DDRC7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDRC7
Genetic Testing Registry DRC7
NextProtQ8IY82 [Medical]
TSGene84229
GENETestsDRC7
Target ValidationDRC7
Huge Navigator DRC7 [HugePedia]
snp3D : Map Gene to Disease84229
BioCentury BCIQDRC7
ClinGenDRC7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84229
Chemical/Pharm GKB GenePA162381380
Clinical trialDRC7
Miscellaneous
canSAR (ICR)DRC7 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDRC7
EVEXDRC7
GoPubMedDRC7
iHOPDRC7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:46:29 CEST 2017

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