DSC1 (desmocollin 1)

Identity

Other names	CDHF1
	DG2/DG3
HGNC	DSC1
Location	18q12.1
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	DSC1   3035
Entrez_Gene	DSC1  1823  desmocollin 1
	Cards
GeneCards	DSC1
Ensembl	DSC1 [Search_View]   ENSG00000134765 [Gene_View]
Genatlas	DSC1
GeneLynx	DSC1
eGenome	DSC1
euGene	1823
	Genomic and cartography
GoldenPath	DSC1  -  18q12.1   chr18:26963212-26996817 -  18q12.1   [Description]    (hg18-March_2006)
Ensembl	DSC1 - 18q12.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	DSC1
	Gene and transcription
Genbank	BC148349 [ ENTREZ ]
Genbank	X72925 [ ENTREZ ]
Genbank	X72925 [ ENTREZ ]
Genbank	Z34522 [ ENTREZ ]
Genbank	Z34522 [ ENTREZ ]
RefSeq	NM_004948 [ SRS ]    NM_004948 [ ENTREZ ]
RefSeq	NM_024421 [ SRS ]    NM_024421 [ ENTREZ ]
RefSeq	AC_000061 [ SRS ]    AC_000061 [ ENTREZ ]
RefSeq	AC_000150 [ SRS ]    AC_000150 [ ENTREZ ]
RefSeq	NC_000018 [ SRS ]    NC_000018 [ ENTREZ ]
RefSeq	NT_010966 [ SRS ]    NT_010966 [ ENTREZ ]
RefSeq	NW_001838467 [ SRS ]    NW_001838467 [ ENTREZ ]
RefSeq	NW_927095 [ SRS ]    NW_927095 [ ENTREZ ]
AceView	DSC1 AceView - NCBI
Unigene	Hs.567260 [ SRS ]    Hs.567260 [ NCBI ]     HS567260 [ spliceNest ]
Fast-db	2989 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q08554 [ SRS]    Q08554 [ EXPASY ]     Q08554 [ INTERPRO ]     Q08554 [ UNIPROT ]
Prosite	PS00232 CADHERIN_1 [ SRS ]    PS00232 CADHERIN_1 [ Expasy ]
Prosite	PS50268 CADHERIN_2 [ SRS ]    PS50268 CADHERIN_2 [ Expasy ]
Interpro	IPR002126 Cadherin [ SRS ]    IPR002126 Cadherin [ EBI ]
Interpro	IPR014868 Cadherin_pro [ SRS ]    IPR014868 Cadherin_pro [ EBI ]
Interpro	IPR009122 Desmo_cadherin [ SRS ]    IPR009122 Desmo_cadherin [ EBI ]
Interpro	IPR009124 Desmocollin [ SRS ]    IPR009124 Desmocollin [ EBI ]
CluSTr	Q08554
Pfam	PF00028 Cadherin [ SRS ]    PF00028 Cadherin [ Sanger ]    pfam00028 [ NCBI-CDD ]
Pfam	PF08758 Cadherin_pro [ SRS ]    PF08758 Cadherin_pro [ Sanger ]    pfam08758 [ NCBI-CDD ]
Smart	SM00112 CA [EMBL]
Blocks	Q08554
HPRD	00511
	Protein Interaction databases
DIP	Q08554
IntAct	Q08554
	Polymorphism : SNP, mutations, diseases
OMIM	125643    [ map ]
GENECLINICS	125643
SNP	DSC1 [dbSNP-NCBI]
SNP	NM_004948 [SNP-NCI]
SNP	NM_024421 [SNP-NCI]
SNP	DSC1 [GeneSNPs - Utah]  DSC1] [HGBASE - SRS]
HAPMAP	DSC1 [HAPMAP]
HGMD	DSC1
	General knowledge
Family Browser	DSC1 [UCSC Family Browser]
SOURCE	NM_004948
SOURCE	NM_024421
SMD	Hs.567260
SAGE	Hs.567260
GO	calcium ion binding [Amigo]  calcium ion binding
GO	protein binding [Amigo]  protein binding
GO	membrane fraction [Amigo]  membrane fraction
GO	plasma membrane [Amigo]  plasma membrane
GO	gap junction [Amigo]  gap junction
GO	cell adhesion [Amigo]  cell adhesion
GO	homophilic cell adhesion [Amigo]  homophilic cell adhesion
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
GO	cell junction [Amigo]  cell junction
KEGG	Cell Communication
PubGene	DSC1
TreeFam	DSC1
CTD	1823 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	DSC1 Related clones (RZPD - Berlin)
	PubMed
PubMed	22 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:08:39 2008