Atlas of Genetics and Cytogenetics in Oncology and Haematology


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DSCAM-IT1 (DSCAM intronic transcript 1)

Identity

Alias_namesDSCAM intronic transcript 1 (non-protein coding)
Other aliaszag4
HGNC (Hugo) DSCAM-IT1
LocusID (NCBI) 100874326
Atlas_Id 62649
Location 21q22.2  [Link to chromosome band 21q22]
Location_base_pair Starts at 41990433 and ends at 42002693 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DSCAM-IT1   41327
Cards
Entrez_Gene (NCBI)DSCAM-IT1  100874326  DSCAM intronic transcript 1
Aliaseszag4
GeneCards (Weizmann)DSCAM-IT1
Ensembl hg19 (Hinxton) [Gene_View]  chr21:41990433-42002693 [Contig_View]  DSCAM-IT1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr21:41990433-42002693 [Contig_View]  DSCAM-IT1 [Vega]
TCGA cBioPortalDSCAM-IT1
AceView (NCBI)DSCAM-IT1
Genatlas (Paris)DSCAM-IT1
WikiGenes100874326
SOURCE (Princeton)DSCAM-IT1
Genetics Home Reference (NIH)DSCAM-IT1
Genomic and cartography
GoldenPath hg19 (UCSC)DSCAM-IT1  -     chr21:41990433-42002693 -  21q22.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DSCAM-IT1  -     21q22.2   [Description]    (hg38-Dec_2013)
EnsemblDSCAM-IT1 - 21q22.2 [CytoView hg19]  DSCAM-IT1 - 21q22.2 [CytoView hg38]
Mapping of homologs : NCBIDSCAM-IT1 [Mapview hg19]  DSCAM-IT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG221591 HG511831 HG511832
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000021 NC_018932 NT_011512 NW_004929426
Consensus coding sequences : CCDS (NCBI)DSCAM-IT1
Cluster EST : UnigeneHs.679746 [ NCBI ]
CGAP (NCI)Hs.679746
Gene ExpressionDSCAM-IT1 [ NCBI-GEO ]   DSCAM-IT1 [ EBI - ARRAY_EXPRESS ]   DSCAM-IT1 [ SEEK ]   DSCAM-IT1 [ MEM ]
Gene Expression Viewer (FireBrowse)DSCAM-IT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874326
GTEX Portal (Tissue expression)DSCAM-IT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DSCAM-IT1
DMDM Disease mutations100874326
Blocks (Seattle)DSCAM-IT1
Protein Interaction databases
BioGRIDDSCAM-IT1
STRING (EMBL)DSCAM-IT1
ZODIACDSCAM-IT1
Ontologies - Pathways
Huge Navigator DSCAM-IT1 [HugePedia]
snp3D : Map Gene to Disease100874326
BioCentury BCIQDSCAM-IT1
ClinGenDSCAM-IT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874326
Clinical trialDSCAM-IT1
Miscellaneous
canSAR (ICR)DSCAM-IT1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDSCAM-IT1
EVEXDSCAM-IT1
GoPubMedDSCAM-IT1
iHOPDSCAM-IT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:02:16 CET 2017

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