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DSCR4 (Down syndrome critical region 4)

Identity

Alias_symbol (synonym)DCRB
Other aliasDSCRB
HGNC (Hugo) DSCR4
LocusID (NCBI) 10281
Atlas_Id 62653
Location 21q22.13  [Link to chromosome band 21q22]
Location_base_pair Starts at 39426313 and ends at 39493454 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DSCR4   3045
Cards
Entrez_Gene (NCBI)DSCR4  10281  Down syndrome critical region 4
AliasesDCRB; DSCRB
GeneCards (Weizmann)DSCR4
Ensembl hg19 (Hinxton)ENSG00000184029 [Gene_View]  chr21:39426313-39493454 [Contig_View]  DSCR4 [Vega]
Ensembl hg38 (Hinxton)ENSG00000184029 [Gene_View]  chr21:39426313-39493454 [Contig_View]  DSCR4 [Vega]
ICGC DataPortalENSG00000184029
TCGA cBioPortalDSCR4
AceView (NCBI)DSCR4
Genatlas (Paris)DSCR4
WikiGenes10281
SOURCE (Princeton)DSCR4
Genetics Home Reference (NIH)DSCR4
Genomic and cartography
GoldenPath hg19 (UCSC)DSCR4  -     chr21:39426313-39493454 -  21q22.13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DSCR4  -     21q22.13   [Description]    (hg38-Dec_2013)
EnsemblDSCR4 - 21q22.13 [CytoView hg19]  DSCR4 - 21q22.13 [CytoView hg38]
Mapping of homologs : NCBIDSCR4 [Mapview hg19]  DSCR4 [Mapview hg38]
OMIM604829   
Gene and transcription
Genbank (Entrez)AB000099 AI817192 BC069729 BC096162 BC096163
RefSeq transcript (Entrez)NM_005867
RefSeq genomic (Entrez)NC_000021 NC_018932 NT_011512 NW_004929426
Consensus coding sequences : CCDS (NCBI)DSCR4
Cluster EST : UnigeneHs.744972 [ NCBI ]
CGAP (NCI)Hs.744972
Alternative Splicing GalleryENSG00000184029
Gene ExpressionDSCR4 [ NCBI-GEO ]   DSCR4 [ EBI - ARRAY_EXPRESS ]   DSCR4 [ SEEK ]   DSCR4 [ MEM ]
Gene Expression Viewer (FireBrowse)DSCR4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10281
GTEX Portal (Tissue expression)DSCR4
Protein : pattern, domain, 3D structure
UniProt/SwissProtP56555   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP56555  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP56555
Splice isoforms : SwissVarP56555
PhosPhoSitePlusP56555
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DSCR4
DMDM Disease mutations10281
Blocks (Seattle)DSCR4
SuperfamilyP56555
Human Protein AtlasENSG00000184029
Peptide AtlasP56555
HPRD05318
IPIIPI00010144   IPI00797623   IPI00979948   
Protein Interaction databases
DIP (DOE-UCLA)P56555
IntAct (EBI)P56555
FunCoupENSG00000184029
BioGRIDDSCR4
STRING (EMBL)DSCR4
ZODIACDSCR4
Ontologies - Pathways
QuickGOP56555
Ontology : AmiGOmolecular_function  cellular_component  biological_process  
Ontology : EGO-EBImolecular_function  cellular_component  biological_process  
NDEx NetworkDSCR4
Atlas of Cancer Signalling NetworkDSCR4
Wikipedia pathwaysDSCR4
Orthology - Evolution
OrthoDB10281
GeneTree (enSembl)ENSG00000184029
Phylogenetic Trees/Animal Genes : TreeFamDSCR4
HOVERGENP56555
HOGENOMP56555
Homologs : HomoloGeneDSCR4
Homology/Alignments : Family Browser (UCSC)DSCR4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDSCR4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DSCR4
dbVarDSCR4
ClinVarDSCR4
1000_GenomesDSCR4 
Exome Variant ServerDSCR4
ExAC (Exome Aggregation Consortium)DSCR4 (select the gene name)
Genetic variants : HAPMAP10281
Genomic Variants (DGV)DSCR4 [DGVbeta]
DECIPHER (Syndromes)21:39426313-39493454  ENSG00000184029
CONAN: Copy Number AnalysisDSCR4 
Mutations
ICGC Data PortalDSCR4 
TCGA Data PortalDSCR4 
Broad Tumor PortalDSCR4
OASIS PortalDSCR4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDSCR4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDSCR4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DSCR4
DgiDB (Drug Gene Interaction Database)DSCR4
DoCM (Curated mutations)DSCR4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DSCR4 (select a term)
intoGenDSCR4
Cancer3DDSCR4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604829   
Orphanet
MedgenDSCR4
Genetic Testing Registry DSCR4
NextProtP56555 [Medical]
TSGene10281
GENETestsDSCR4
Huge Navigator DSCR4 [HugePedia]
snp3D : Map Gene to Disease10281
BioCentury BCIQDSCR4
ClinGenDSCR4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10281
Chemical/Pharm GKB GenePA27497
Clinical trialDSCR4
Miscellaneous
canSAR (ICR)DSCR4 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDSCR4
EVEXDSCR4
GoPubMedDSCR4
iHOPDSCR4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:02:17 CET 2017

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