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DSCR9 (Down syndrome critical region 9)

Identity

Alias (NCBI)NCRNA00038
HGNC (Hugo) DSCR9
HGNC Alias symbNCRNA00038
HGNC Alias namenon-protein coding RNA 38
LocusID (NCBI) 257203
Atlas_Id 62654
Location 21q22.13  [Link to chromosome band 21q22]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DSCR9 (21q22.13) / RAD21 (8q24.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)DSCR9   16301
Cards
Entrez_Gene (NCBI)DSCR9    Down syndrome critical region 9
AliasesNCRNA00038
GeneCards (Weizmann)DSCR9
Ensembl hg19 (Hinxton)ENSG00000230366 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230366 [Gene_View]  ENSG00000230366 [Sequence]  - [Contig_View]  DSCR9 [Vega]
ICGC DataPortalENSG00000230366
TCGA cBioPortalDSCR9
AceView (NCBI)DSCR9
Genatlas (Paris)DSCR9
SOURCE (Princeton)DSCR9
Genetics Home Reference (NIH)DSCR9
Genomic and cartography
GoldenPath hg38 (UCSC)DSCR9  -  
GoldenPath hg19 (UCSC)DSCR9  -  
GoldenPathDSCR9 - [CytoView hg19]  DSCR9 - [CytoView hg38]
ImmunoBaseENSG00000230366
genome Data Viewer NCBIDSCR9 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AB066100 AB212286 AB212287 AB212288 AB212289
RefSeq transcript (Entrez)NM_148675
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DSCR9
Alternative Splicing GalleryENSG00000230366
Gene ExpressionDSCR9 [ NCBI-GEO ]   DSCR9 [ EBI - ARRAY_EXPRESS ]   DSCR9 [ SEEK ]   DSCR9 [ MEM ]
Gene Expression Viewer (FireBrowse)DSCR9 [ Firebrowse - Broad ]
GenevisibleExpression of DSCR9 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)257203
GTEX Portal (Tissue expression)DSCR9
Human Protein AtlasENSG00000230366-DSCR9 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP59020   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP59020  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP59020
Splice isoforms : SwissVarP59020
PhosPhoSitePlusP59020
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DSCR9
Blocks (Seattle)DSCR9
SuperfamilyP59020
Human Protein Atlas [tissue]ENSG00000230366-DSCR9 [tissue]
Peptide AtlasP59020
HPRD10925
IPIIPI00164926   
Protein Interaction databases
DIP (DOE-UCLA)P59020
IntAct (EBI)P59020
BioGRIDDSCR9
STRING (EMBL)DSCR9
ZODIACDSCR9
Ontologies - Pathways
QuickGOP59020
Ontology : AmiGOmolecular_function  cellular_component  biological_process  
Ontology : EGO-EBImolecular_function  cellular_component  biological_process  
NDEx NetworkDSCR9
Atlas of Cancer Signalling NetworkDSCR9
Wikipedia pathwaysDSCR9
Orthology - Evolution
OrthoDB257203
GeneTree (enSembl)ENSG00000230366
Phylogenetic Trees/Animal Genes : TreeFamDSCR9
HOGENOMP59020
Homologs : HomoloGeneDSCR9
Homology/Alignments : Family Browser (UCSC)DSCR9
Gene fusions - Rearrangements
Fusion : QuiverDSCR9
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDSCR9 [hg38]
dbVarDSCR9
ClinVarDSCR9
MonarchDSCR9
1000_GenomesDSCR9 
Exome Variant ServerDSCR9
GNOMAD BrowserENSG00000230366
Varsome BrowserDSCR9
Genomic Variants (DGV)DSCR9 [DGVbeta]
DECIPHERDSCR9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDSCR9 
Mutations
ICGC Data PortalDSCR9 
TCGA Data PortalDSCR9 
Broad Tumor PortalDSCR9
OASIS PortalDSCR9 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDDSCR9
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DSCR9
DgiDB (Drug Gene Interaction Database)DSCR9
DoCM (Curated mutations)DSCR9 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DSCR9 (select a term)
intoGenDSCR9
Cancer3DDSCR9(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETDSCR9
MedgenDSCR9
Genetic Testing Registry DSCR9
NextProtP59020 [Medical]
GENETestsDSCR9
Target ValidationDSCR9
Huge Navigator DSCR9 [HugePedia]
ClinGenDSCR9
Clinical trials, drugs, therapy
MyCancerGenomeDSCR9
Protein Interactions : CTD
Pharm GKB GenePA38399
Clinical trialDSCR9
Miscellaneous
canSAR (ICR)DSCR9 (select the gene name)
HarmonizomeDSCR9
DataMed IndexDSCR9
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDSCR9
EVEXDSCR9
GoPubMedDSCR9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 16:52:22 CET 2020

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