DSG1 (desmoglein 1)

Identity

Other names	CDHF4
	DG1
	DSG
HGNC	DSG1
Location	18q12.1
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	DSG1   3048
Entrez_Gene	DSG1  1828  desmoglein 1
	Cards
GeneCards	DSG1
Ensembl	DSG1 [Search_View]   ENSG00000134760 [Gene_View]
Genatlas	DSG1
GeneLynx	DSG1
eGenome	DSG1
euGene	1828
	Genomic and cartography
GoldenPath	DSG1  -  18q12.1   chr18:27152050-27191391 +  18q12.1   [Description]    (hg18-March_2006)
Ensembl	DSG1 - 18q12.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	DSG1
	Gene and transcription
Genbank	AF088042 [ ENTREZ ]
Genbank	AF097935 [ ENTREZ ]
Genbank	BC148374 [ ENTREZ ]
Genbank	BC153001 [ ENTREZ ]
Genbank	BX476267 [ ENTREZ ]
RefSeq	NM_001942 [ SRS ]    NM_001942 [ ENTREZ ]
RefSeq	AC_000061 [ SRS ]    AC_000061 [ ENTREZ ]
RefSeq	AC_000150 [ SRS ]    AC_000150 [ ENTREZ ]
RefSeq	NC_000018 [ SRS ]    NC_000018 [ ENTREZ ]
RefSeq	NT_010966 [ SRS ]    NT_010966 [ ENTREZ ]
RefSeq	NW_001838467 [ SRS ]    NW_001838467 [ ENTREZ ]
RefSeq	NW_927095 [ SRS ]    NW_927095 [ ENTREZ ]
AceView	DSG1 AceView - NCBI
Unigene	Hs.2633 [ SRS ]    Hs.2633 [ NCBI ]     HS2633 [ spliceNest ]
Fast-db	3011 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q02413 [ SRS]    Q02413 [ EXPASY ]     Q02413 [ INTERPRO ]     Q02413 [ UNIPROT ]
Prosite	PS00232 CADHERIN_1 [ SRS ]    PS00232 CADHERIN_1 [ Expasy ]
Prosite	PS50268 CADHERIN_2 [ SRS ]    PS50268 CADHERIN_2 [ Expasy ]
Interpro	IPR002126 Cadherin [ SRS ]    IPR002126 Cadherin [ EBI ]
Interpro	IPR000233 Cadherin_C_term [ SRS ]    IPR000233 Cadherin_C_term [ EBI ]
Interpro	IPR009122 Desmo_cadherin [ SRS ]    IPR009122 Desmo_cadherin [ EBI ]
Interpro	IPR009123 Desmoglein [ SRS ]    IPR009123 Desmoglein [ EBI ]
Interpro	IPR015487 Desmoglein1 [ SRS ]    IPR015487 Desmoglein1 [ EBI ]
CluSTr	Q02413
Pfam	PF00028 Cadherin [ SRS ]    PF00028 Cadherin [ Sanger ]    pfam00028 [ NCBI-CDD ]
Pfam	PF01049 Cadherin_C [ SRS ]    PF01049 Cadherin_C [ Sanger ]    pfam01049 [ NCBI-CDD ]
Smart	SM00112 CA [EMBL]
Blocks	Q02413
HPRD	00515
	Protein Interaction databases
DIP	Q02413
IntAct	Q02413
	Polymorphism : SNP, mutations, diseases
OMIM	125670;148700    [ map ]
GENECLINICS	125670;148700
SNP	DSG1 [dbSNP-NCBI]
SNP	NM_001942 [SNP-NCI]
SNP	DSG1 [GeneSNPs - Utah]  DSG1] [HGBASE - SRS]
HAPMAP	DSG1 [HAPMAP]
HGMD	DSG1
	General knowledge
Family Browser	DSG1 [UCSC Family Browser]
SOURCE	NM_001942
SMD	Hs.2633
SAGE	Hs.2633
GO	calcium ion binding [Amigo]  calcium ion binding
GO	protein binding [Amigo]  protein binding
GO	cytosol [Amigo]  cytosol
GO	plasma membrane [Amigo]  plasma membrane
GO	plasma membrane [Amigo]  plasma membrane
GO	cell-cell junction assembly [Amigo]  cell-cell junction assembly
GO	homophilic cell adhesion [Amigo]  homophilic cell adhesion
GO	toxin binding [Amigo]  toxin binding
GO	integral to membrane [Amigo]  integral to membrane
GO	calcium-dependent cell-cell adhesion [Amigo]  calcium-dependent cell-cell adhesion
GO	cell junction [Amigo]  cell junction
GO	desmosome [Amigo]  desmosome
KEGG	Cell Communication
PubGene	DSG1
TreeFam	DSG1
CTD	1828 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	DSG1 Related clones (RZPD - Berlin)
	PubMed
PubMed	42 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:08:41 2008