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DSPP (dentin sialophosphoprotein)

Identity

Other namesDFNA39
DGI1
DMP3
DPP
DSP
DTDP2
HGNC (Hugo) DSPP
LocusID (NCBI) 1834
Location 4q22.1
Location_base_pair Starts at 88529681 and ends at 88538025 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)DSPP   3054
Cards
Entrez_Gene (NCBI)DSPP  1834  dentin sialophosphoprotein
GeneCards (Weizmann)DSPP
Ensembl (Hinxton)ENSG00000152591 [Gene_View]  chr4:88529681-88538025 [Contig_View]  DSPP [Vega]
ICGC DataPortalENSG00000152591
cBioPortalDSPP
AceView (NCBI)DSPP
Genatlas (Paris)DSPP
WikiGenes1834
SOURCE (Princeton)NM_014208
Genomic and cartography
GoldenPath (UCSC)DSPP  -  4q22.1   chr4:88529681-88538025 +  4q22.1   [Description]    (hg19-Feb_2009)
EnsemblDSPP - 4q22.1 [CytoView]
Mapping of homologs : NCBIDSPP [Mapview]
OMIM125420   125485   125490   125500   605594   
Gene and transcription
Genbank (Entrez)AF094508
RefSeq transcript (Entrez)NM_014208
RefSeq genomic (Entrez)AC_000136 NC_000004 NC_018915 NG_011595 NT_016354 NW_001838915 NW_004929320
Consensus coding sequences : CCDS (NCBI)DSPP
Cluster EST : UnigeneHs.678914 [ NCBI ]
CGAP (NCI)Hs.678914
Alternative Splicing : Fast-db (Paris)GSHG0042207
Alternative Splicing GalleryENSG00000152591
Gene ExpressionDSPP [ NCBI-GEO ]     DSPP [ SEEK ]   DSPP [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NZW4 (Uniprot)
NextProtQ9NZW4  [Medical]
With graphics : InterProQ9NZW4
Splice isoforms : SwissVarQ9NZW4 (Swissvar)
Related proteins : CluSTrQ9NZW4
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM Disease mutations1834
Blocks (Seattle)Q9NZW4
Human Protein AtlasENSG00000152591 [gene] [tissue] [antibody] [cell] [cancer]
Peptide AtlasQ9NZW4
HPRD00508
IPIIPI00872967   IPI00921088   IPI00920986   IPI00921326   IPI00921147   IPI00921239   
Protein Interaction databases
DIP (DOE-UCLA)Q9NZW4
IntAct (EBI)Q9NZW4
FunCoupENSG00000152591
BioGRIDDSPP
InParanoidQ9NZW4
Interologous Interaction database Q9NZW4
IntegromeDBDSPP
STRING (EMBL)DSPP
Ontologies - Pathways
Ontology : AmiGOskeletal system development  ossification  extracellular matrix structural constituent  calcium ion binding  collagen binding  extracellular region  proteinaceous extracellular matrix  multicellular organismal development  extracellular matrix organization  biomineral tissue development  cellular response to cell-matrix adhesion  
Ontology : EGO-EBIskeletal system development  ossification  extracellular matrix structural constituent  calcium ion binding  collagen binding  extracellular region  proteinaceous extracellular matrix  multicellular organismal development  extracellular matrix organization  biomineral tissue development  cellular response to cell-matrix adhesion  
Protein Interaction DatabaseDSPP
Wikipedia pathwaysDSPP
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)DSPP
snp3D : Map Gene to Disease1834
SNP (GeneSNP Utah)DSPP
SNP : HGBaseDSPP
Genetic variants : HAPMAPDSPP
Exome VariantDSPP
1000_GenomesDSPP 
ICGC programENSG00000152591 
Somatic Mutations in Cancer : COSMICDSPP 
CONAN: Copy Number AnalysisDSPP 
Mutations and Diseases : HGMDDSPP
Mutations and Diseases : intOGenDSPP
Genomic VariantsDSPP  DSPP [DGVbeta]
dbVarDSPP
ClinVarDSPP
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM125420    125485    125490    125500    605594   
MedgenDSPP
GENETestsDSPP
Disease Genetic AssociationDSPP
Huge Navigator DSPP [HugePedia]  DSPP [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneDSPP
Homology/Alignments : Family Browser (UCSC)DSPP
Phylogenetic Trees/Animal Genes : TreeFamDSPP
Chemical/Protein Interactions : CTD1834
Chemical/Pharm GKB GenePA27507
Clinical trialDSPP
Cancer Resource (Charite)ENSG00000152591
Other databases
Probes
Litterature
PubMed55 Pubmed reference(s) in Entrez
CoreMineDSPP
iHOPDSPP
OncoSearchDSPP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 22 18:48:38 CEST 2014

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