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DSPP (dentin sialophosphoprotein)

Identity

Other namesDFNA39
DGI1
DMP3
DPP
DSP
DTDP2
HGNC (Hugo) DSPP
LocusID (NCBI) 1834
Location 4q22.1
Location_base_pair Starts at 88529681 and ends at 88538025 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)DSPP   3054
Cards
Entrez_Gene (NCBI)DSPP  1834  dentin sialophosphoprotein
GeneCards (Weizmann)DSPP
Ensembl hg19 (Hinxton)ENSG00000152591 [Gene_View]  chr4:88529681-88538025 [Contig_View]  DSPP [Vega]
Ensembl hg38 (Hinxton)ENSG00000152591 [Gene_View]  chr4:88529681-88538025 [Contig_View]  DSPP [Vega]
ICGC DataPortalENSG00000152591
cBioPortalDSPP
AceView (NCBI)DSPP
Genatlas (Paris)DSPP
WikiGenes1834
SOURCE (Princeton)DSPP
Genomic and cartography
GoldenPath hg19 (UCSC)DSPP  -     chr4:88529681-88538025 +  4q22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DSPP  -     4q22.1   [Description]    (hg38-Dec_2013)
EnsemblDSPP - 4q22.1 [CytoView hg19]  DSPP - 4q22.1 [CytoView hg38]
Mapping of homologs : NCBIDSPP [Mapview hg19]  DSPP [Mapview hg38]
OMIM125420   125485   125490   125500   605594   
Gene and transcription
Genbank (Entrez)AF094508
RefSeq transcript (Entrez)NM_014208
RefSeq genomic (Entrez)AC_000136 NC_000004 NC_018915 NG_011595 NT_016354 NW_001838915 NW_004929320
Consensus coding sequences : CCDS (NCBI)DSPP
Cluster EST : UnigeneHs.678914 [ NCBI ]
CGAP (NCI)Hs.678914
Alternative Splicing : Fast-db (Paris)GSHG0042207
Alternative Splicing GalleryENSG00000152591
Gene ExpressionDSPP [ NCBI-GEO ]     DSPP [ SEEK ]   DSPP [ MEM ]
SOURCE (Princeton)Expression in : [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NZW4 (Uniprot)
NextProtQ9NZW4  [Medical]
With graphics : InterProQ9NZW4
Splice isoforms : SwissVarQ9NZW4 (Swissvar)
Related proteins : CluSTrQ9NZW4
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM Disease mutations1834
Blocks (Seattle)Q9NZW4
Human Protein AtlasENSG00000152591
Peptide AtlasQ9NZW4
HPRD00508
IPIIPI00872967   IPI00921088   IPI00920986   IPI00921326   IPI00921147   IPI00921239   
Protein Interaction databases
DIP (DOE-UCLA)Q9NZW4
IntAct (EBI)Q9NZW4
FunCoupENSG00000152591
BioGRIDDSPP
IntegromeDBDSPP
STRING (EMBL)DSPP
Ontologies - Pathways
QuickGOQ9NZW4
Ontology : AmiGOskeletal system development  ossification  extracellular matrix structural constituent  calcium ion binding  collagen binding  extracellular region  proteinaceous extracellular matrix  multicellular organismal development  extracellular matrix organization  biomineral tissue development  cellular response to cell-matrix adhesion  
Ontology : EGO-EBIskeletal system development  ossification  extracellular matrix structural constituent  calcium ion binding  collagen binding  extracellular region  proteinaceous extracellular matrix  multicellular organismal development  extracellular matrix organization  biomineral tissue development  cellular response to cell-matrix adhesion  
Protein Interaction DatabaseDSPP
DoCM (Curated mutations)DSPP
Wikipedia pathwaysDSPP
Gene fusion - rearrangements
Polymorphisms : SNP, variants
NCBI Variation ViewerDSPP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DSPP
dbVarDSPP
ClinVarDSPP
1000_GenomesDSPP 
Exome Variant ServerDSPP
SNP (GeneSNP Utah)DSPP
SNP : HGBaseDSPP
Genetic variants : HAPMAPDSPP
Genomic VariantsDSPP  DSPP [DGVbeta]
Mutations
ICGC Data PortalENSG00000152591 
Somatic Mutations in Cancer : COSMICDSPP 
CONAN: Copy Number AnalysisDSPP 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
Diseases
DECIPHER (Syndromes)4:88529681-88538025
Mutations and Diseases : HGMDDSPP
OMIM125420    125485    125490    125500    605594   
MedgenDSPP
NextProtQ9NZW4 [Medical]
GENETestsDSPP
Disease Genetic AssociationDSPP
Huge Navigator DSPP [HugePedia]  DSPP [HugeCancerGEM]
snp3D : Map Gene to Disease1834
DGIdb (Drug Gene Interaction db)DSPP
General knowledge
Homologs : HomoloGeneDSPP
Homology/Alignments : Family Browser (UCSC)DSPP
Phylogenetic Trees/Animal Genes : TreeFamDSPP
Chemical/Protein Interactions : CTD1834
Chemical/Pharm GKB GenePA27507
Clinical trialDSPP
Cancer Resource (Charite)ENSG00000152591
Other databases
Probes
Litterature
PubMed55 Pubmed reference(s) in Entrez
CoreMineDSPP
GoPubMedDSPP
iHOPDSPP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2014Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 20 21:17:03 CET 2014

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