Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

DTD2 (D-tyrosyl-tRNA deacylase 2 (putative))

Identity

Alias_namesC14orf126
chromosome 14 open reading frame 126
Alias_symbol (synonym)MGC9912
Other alias
HGNC (Hugo) DTD2
LocusID (NCBI) 112487
Atlas_Id 62662
Location 14q12  [Link to chromosome band 14q12]
Location_base_pair Starts at 31446036 and ends at 31457474 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
DTD2 (14q12) / CGRRF1 (14q22.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DTD2   20277
Cards
Entrez_Gene (NCBI)DTD2  112487  D-tyrosyl-tRNA deacylase 2 (putative)
AliasesC14orf126
GeneCards (Weizmann)DTD2
Ensembl hg19 (Hinxton)ENSG00000129480 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000129480 [Gene_View]  chr14:31446036-31457474 [Contig_View]  DTD2 [Vega]
ICGC DataPortalENSG00000129480
TCGA cBioPortalDTD2
AceView (NCBI)DTD2
Genatlas (Paris)DTD2
WikiGenes112487
SOURCE (Princeton)DTD2
Genetics Home Reference (NIH)DTD2
Genomic and cartography
GoldenPath hg38 (UCSC)DTD2  -     chr14:31446036-31457474 -  14q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DTD2  -     14q12   [Description]    (hg19-Feb_2009)
EnsemblDTD2 - 14q12 [CytoView hg19]  DTD2 - 14q12 [CytoView hg38]
Mapping of homologs : NCBIDTD2 [Mapview hg19]  DTD2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK022703 AK055367 BC010618 BI553940 BU675173
RefSeq transcript (Entrez)NM_080664
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DTD2
Cluster EST : UnigeneHs.116014 [ NCBI ]
CGAP (NCI)Hs.116014
Alternative Splicing GalleryENSG00000129480
Gene ExpressionDTD2 [ NCBI-GEO ]   DTD2 [ EBI - ARRAY_EXPRESS ]   DTD2 [ SEEK ]   DTD2 [ MEM ]
Gene Expression Viewer (FireBrowse)DTD2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)112487
GTEX Portal (Tissue expression)DTD2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96FN9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96FN9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96FN9
Splice isoforms : SwissVarQ96FN9
Catalytic activity : Enzyme3.1.-.- [ Enzyme-Expasy ]   3.1.-.-3.1.-.- [ IntEnz-EBI ]   3.1.-.- [ BRENDA ]   3.1.-.- [ KEGG ]   
PhosPhoSitePlusQ96FN9
Domains : Interpro (EBI)Daa-tRNA_deacyls_DTD    DTD-like_dom   
Domain families : Pfam (Sanger)Tyr_Deacylase (PF02580)   
Domain families : Pfam (NCBI)pfam02580   
Conserved Domain (NCBI)DTD2
DMDM Disease mutations112487
Blocks (Seattle)DTD2
SuperfamilyQ96FN9
Human Protein AtlasENSG00000129480
Peptide AtlasQ96FN9
HPRD16599
IPIIPI00062050   IPI01022742   
Protein Interaction databases
DIP (DOE-UCLA)Q96FN9
IntAct (EBI)Q96FN9
FunCoupENSG00000129480
BioGRIDDTD2
STRING (EMBL)DTD2
ZODIACDTD2
Ontologies - Pathways
QuickGOQ96FN9
Ontology : AmiGOaminoacyl-tRNA editing activity  molecular_function  protein binding  cellular_component  cytoplasm  tRNA metabolic process  regulation of translational fidelity  biological_process  D-tyrosyl-tRNA(Tyr) deacylase activity  
Ontology : EGO-EBIaminoacyl-tRNA editing activity  molecular_function  protein binding  cellular_component  cytoplasm  tRNA metabolic process  regulation of translational fidelity  biological_process  D-tyrosyl-tRNA(Tyr) deacylase activity  
NDEx NetworkDTD2
Atlas of Cancer Signalling NetworkDTD2
Wikipedia pathwaysDTD2
Orthology - Evolution
OrthoDB112487
GeneTree (enSembl)ENSG00000129480
Phylogenetic Trees/Animal Genes : TreeFamDTD2
HOVERGENQ96FN9
HOGENOMQ96FN9
Homologs : HomoloGeneDTD2
Homology/Alignments : Family Browser (UCSC)DTD2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDTD2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DTD2
dbVarDTD2
ClinVarDTD2
1000_GenomesDTD2 
Exome Variant ServerDTD2
ExAC (Exome Aggregation Consortium)DTD2 (select the gene name)
Genetic variants : HAPMAP112487
Genomic Variants (DGV)DTD2 [DGVbeta]
DECIPHERDTD2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDTD2 
Mutations
ICGC Data PortalDTD2 
TCGA Data PortalDTD2 
Broad Tumor PortalDTD2
OASIS PortalDTD2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDDTD2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DTD2
DgiDB (Drug Gene Interaction Database)DTD2
DoCM (Curated mutations)DTD2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DTD2 (select a term)
intoGenDTD2
Cancer3DDTD2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDTD2
Genetic Testing Registry DTD2
NextProtQ96FN9 [Medical]
TSGene112487
GENETestsDTD2
Target ValidationDTD2
Huge Navigator DTD2 [HugePedia]
snp3D : Map Gene to Disease112487
BioCentury BCIQDTD2
ClinGenDTD2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD112487
Chemical/Pharm GKB GenePA134963117
Clinical trialDTD2
Miscellaneous
canSAR (ICR)DTD2 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDTD2
EVEXDTD2
GoPubMedDTD2
iHOPDTD2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:46:33 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.