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DTWD2 (DTW domain containing 2)

Identity

Alias_symbol (synonym)FLJ33977
Other alias-
HGNC (Hugo) DTWD2
LocusID (NCBI) 285605
Atlas_Id 62666
Location 5q23.1  [Link to chromosome band 5q23]
Location_base_pair Starts at 118171769 and ends at 118323915 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ACIN1 (14q11.2) / DTWD2 (5q23.1)PAPPA (9q33.1) / DTWD2 (5q23.1)SEMA6A (5q23.1) / DTWD2 (5q23.1)
SPINT1 (15q15.1) / DTWD2 (5q23.1)TRIM63 (1p36.11) / DTWD2 (5q23.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DTWD2   19334
Cards
Entrez_Gene (NCBI)DTWD2  285605  DTW domain containing 2
Aliases
GeneCards (Weizmann)DTWD2
Ensembl hg19 (Hinxton) [Gene_View]  chr5:118171769-118323915 [Contig_View]  DTWD2 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:118171769-118323915 [Contig_View]  DTWD2 [Vega]
TCGA cBioPortalDTWD2
AceView (NCBI)DTWD2
Genatlas (Paris)DTWD2
WikiGenes285605
SOURCE (Princeton)DTWD2
Genetics Home Reference (NIH)DTWD2
Genomic and cartography
GoldenPath hg19 (UCSC)DTWD2  -     chr5:118171769-118323915 -  5q23.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DTWD2  -     5q23.1   [Description]    (hg38-Dec_2013)
EnsemblDTWD2 - 5q23.1 [CytoView hg19]  DTWD2 - 5q23.1 [CytoView hg38]
Mapping of homologs : NCBIDTWD2 [Mapview hg19]  DTWD2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091296 AK124328 AW009893 BC012294 BC114508
RefSeq transcript (Entrez)NM_001308081 NM_173666
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_034772 NW_004929323
Consensus coding sequences : CCDS (NCBI)DTWD2
Cluster EST : UnigeneHs.655891 [ NCBI ]
CGAP (NCI)Hs.655891
Gene ExpressionDTWD2 [ NCBI-GEO ]   DTWD2 [ EBI - ARRAY_EXPRESS ]   DTWD2 [ SEEK ]   DTWD2 [ MEM ]
Gene Expression Viewer (FireBrowse)DTWD2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)285605
GTEX Portal (Tissue expression)DTWD2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NBA8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NBA8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NBA8
Splice isoforms : SwissVarQ8NBA8
PhosPhoSitePlusQ8NBA8
Domains : Interpro (EBI)DTW   
Domain families : Pfam (Sanger)DTW (PF03942)   
Domain families : Pfam (NCBI)pfam03942   
Conserved Domain (NCBI)DTWD2
DMDM Disease mutations285605
Blocks (Seattle)DTWD2
SuperfamilyQ8NBA8
Peptide AtlasQ8NBA8
HPRD08168
IPIIPI00168209   IPI00964587   IPI00964348   IPI00964903   
Protein Interaction databases
DIP (DOE-UCLA)Q8NBA8
IntAct (EBI)Q8NBA8
BioGRIDDTWD2
STRING (EMBL)DTWD2
ZODIACDTWD2
Ontologies - Pathways
QuickGOQ8NBA8
Ontology : AmiGOpositive regulation of protein targeting to mitochondrion  
Ontology : EGO-EBIpositive regulation of protein targeting to mitochondrion  
NDEx NetworkDTWD2
Atlas of Cancer Signalling NetworkDTWD2
Wikipedia pathwaysDTWD2
Orthology - Evolution
OrthoDB285605
Phylogenetic Trees/Animal Genes : TreeFamDTWD2
HOVERGENQ8NBA8
HOGENOMQ8NBA8
Homologs : HomoloGeneDTWD2
Homology/Alignments : Family Browser (UCSC)DTWD2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDTWD2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DTWD2
dbVarDTWD2
ClinVarDTWD2
1000_GenomesDTWD2 
Exome Variant ServerDTWD2
ExAC (Exome Aggregation Consortium)DTWD2 (select the gene name)
Genetic variants : HAPMAP285605
Genomic Variants (DGV)DTWD2 [DGVbeta]
DECIPHER (Syndromes)5:118171769-118323915  
CONAN: Copy Number AnalysisDTWD2 
Mutations
ICGC Data PortalDTWD2 
TCGA Data PortalDTWD2 
Broad Tumor PortalDTWD2
OASIS PortalDTWD2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDTWD2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDTWD2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DTWD2
DgiDB (Drug Gene Interaction Database)DTWD2
DoCM (Curated mutations)DTWD2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DTWD2 (select a term)
intoGenDTWD2
Cancer3DDTWD2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDTWD2
Genetic Testing Registry DTWD2
NextProtQ8NBA8 [Medical]
TSGene285605
GENETestsDTWD2
Huge Navigator DTWD2 [HugePedia]
snp3D : Map Gene to Disease285605
BioCentury BCIQDTWD2
ClinGenDTWD2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285605
Chemical/Pharm GKB GenePA142671943
Clinical trialDTWD2
Miscellaneous
canSAR (ICR)DTWD2 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDTWD2
EVEXDTWD2
GoPubMedDTWD2
iHOPDTWD2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:02:19 CET 2017

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