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DTX2P1-UPK3BP1-PMS2P11 (DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene)

Identity

Alias_namesDTX2P1-UPK3BP1-PMS2P11 readthrough (non-protein coding)
Other aliasPMS2L11
HGNC (Hugo) DTX2P1-UPK3BP1-PMS2P11
LocusID (NCBI) 441263
Atlas_Id 43064
Location 7q11.23  [Link to chromosome band 7q11]
Location_base_pair Starts at 76980822 and ends at 77023759 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
IPP (1p34.1) / DTX2P1-UPK3BP1-PMS2P11 (7q11.23)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DTX2P1-UPK3BP1-PMS2P11   42360
Cards
Entrez_Gene (NCBI)DTX2P1-UPK3BP1-PMS2P11  441263  DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene
AliasesPMS2L11
GeneCards (Weizmann)DTX2P1-UPK3BP1-PMS2P11
Ensembl hg19 (Hinxton)ENSG00000265479 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265479 [Gene_View]  chr7:76980822-77023759 [Contig_View]  DTX2P1-UPK3BP1-PMS2P11 [Vega]
ICGC DataPortalENSG00000265479
TCGA cBioPortalDTX2P1-UPK3BP1-PMS2P11
AceView (NCBI)DTX2P1-UPK3BP1-PMS2P11
Genatlas (Paris)DTX2P1-UPK3BP1-PMS2P11
WikiGenes441263
SOURCE (Princeton)DTX2P1-UPK3BP1-PMS2P11
Genetics Home Reference (NIH)DTX2P1-UPK3BP1-PMS2P11
Genomic and cartography
GoldenPath hg38 (UCSC)DTX2P1-UPK3BP1-PMS2P11  -     chr7:76980822-77023759 +  7q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DTX2P1-UPK3BP1-PMS2P11  -     7q11.23   [Description]    (hg19-Feb_2009)
EnsemblDTX2P1-UPK3BP1-PMS2P11 - 7q11.23 [CytoView hg19]  DTX2P1-UPK3BP1-PMS2P11 - 7q11.23 [CytoView hg38]
Mapping of homologs : NCBIDTX2P1-UPK3BP1-PMS2P11 [Mapview hg19]  DTX2P1-UPK3BP1-PMS2P11 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC015750 BG982651 BM709868 BP230837 DR007973
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DTX2P1-UPK3BP1-PMS2P11
Cluster EST : UnigeneHs.729355 [ NCBI ]
CGAP (NCI)Hs.729355
Alternative Splicing GalleryENSG00000265479
Gene ExpressionDTX2P1-UPK3BP1-PMS2P11 [ NCBI-GEO ]   DTX2P1-UPK3BP1-PMS2P11 [ EBI - ARRAY_EXPRESS ]   DTX2P1-UPK3BP1-PMS2P11 [ SEEK ]   DTX2P1-UPK3BP1-PMS2P11 [ MEM ]
Gene Expression Viewer (FireBrowse)DTX2P1-UPK3BP1-PMS2P11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)441263
GTEX Portal (Tissue expression)DTX2P1-UPK3BP1-PMS2P11
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DTX2P1-UPK3BP1-PMS2P11
DMDM Disease mutations441263
Blocks (Seattle)DTX2P1-UPK3BP1-PMS2P11
Human Protein AtlasENSG00000265479
IPIIPI00969509   
Protein Interaction databases
FunCoupENSG00000265479
BioGRIDDTX2P1-UPK3BP1-PMS2P11
STRING (EMBL)DTX2P1-UPK3BP1-PMS2P11
ZODIACDTX2P1-UPK3BP1-PMS2P11
Ontologies - Pathways
Huge Navigator DTX2P1-UPK3BP1-PMS2P11 [HugePedia]
snp3D : Map Gene to Disease441263
BioCentury BCIQDTX2P1-UPK3BP1-PMS2P11
ClinGenDTX2P1-UPK3BP1-PMS2P11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD441263
Chemical/Pharm GKB GenePA33451
Clinical trialDTX2P1-UPK3BP1-PMS2P11
Miscellaneous
canSAR (ICR)DTX2P1-UPK3BP1-PMS2P11 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDTX2P1-UPK3BP1-PMS2P11
EVEXDTX2P1-UPK3BP1-PMS2P11
GoPubMedDTX2P1-UPK3BP1-PMS2P11
iHOPDTX2P1-UPK3BP1-PMS2P11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 16:59:58 CEST 2017

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