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DUS1L (dihydrouridine synthase 1-like (S. cerevisiae))

Identity

Alias_namesdihydrouridine synthase 1-like (S. cerevisiae)
Alias_symbol (synonym)PP3111
DUS1
Other alias
HGNC (Hugo) DUS1L
LocusID (NCBI) 64118
Atlas_Id 62671
Location 17q25.3  [Link to chromosome band 17q25]
Location_base_pair Starts at 80015748 and ends at 80023697 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DUS1L   30086
Cards
Entrez_Gene (NCBI)DUS1L  64118  dihydrouridine synthase 1-like (S. cerevisiae)
AliasesDUS1; PP3111
GeneCards (Weizmann)DUS1L
Ensembl hg19 (Hinxton) [Gene_View]  chr17:80015748-80023697 [Contig_View]  DUS1L [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:80015748-80023697 [Contig_View]  DUS1L [Vega]
TCGA cBioPortalDUS1L
AceView (NCBI)DUS1L
Genatlas (Paris)DUS1L
WikiGenes64118
SOURCE (Princeton)DUS1L
Genetics Home Reference (NIH)DUS1L
Genomic and cartography
GoldenPath hg19 (UCSC)DUS1L  -     chr17:80015748-80023697 -  17q25.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DUS1L  -     17q25.3   [Description]    (hg38-Dec_2013)
EnsemblDUS1L - 17q25.3 [CytoView hg19]  DUS1L - 17q25.3 [CytoView hg38]
Mapping of homologs : NCBIDUS1L [Mapview hg19]  DUS1L [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF202637 AK226154 AK298330 AL539521 BC003659
RefSeq transcript (Entrez)NM_022156
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010663 NW_004929408
Consensus coding sequences : CCDS (NCBI)DUS1L
Cluster EST : UnigeneHs.741994 [ NCBI ]
CGAP (NCI)Hs.741994
Gene ExpressionDUS1L [ NCBI-GEO ]   DUS1L [ EBI - ARRAY_EXPRESS ]   DUS1L [ SEEK ]   DUS1L [ MEM ]
Gene Expression Viewer (FireBrowse)DUS1L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64118
GTEX Portal (Tissue expression)DUS1L
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6P1R4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6P1R4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6P1R4
Splice isoforms : SwissVarQ6P1R4
Catalytic activity : Enzyme1.3.1.- [ Enzyme-Expasy ]   1.3.1.-1.3.1.- [ IntEnz-EBI ]   1.3.1.- [ BRENDA ]   1.3.1.- [ KEGG ]   
PhosPhoSitePlusQ6P1R4
Domaine pattern : Prosite (Expaxy)UPF0034 (PS01136)   
Domains : Interpro (EBI)Aldolase_TIM    tRNA_hU_synthase    tRNA_hU_synthase_CS   
Domain families : Pfam (Sanger)Dus (PF01207)   
Domain families : Pfam (NCBI)pfam01207   
Conserved Domain (NCBI)DUS1L
DMDM Disease mutations64118
Blocks (Seattle)DUS1L
SuperfamilyQ6P1R4
Peptide AtlasQ6P1R4
HPRD17885
IPIIPI00335251   IPI01011682   IPI00329754   IPI00005538   
Protein Interaction databases
DIP (DOE-UCLA)Q6P1R4
IntAct (EBI)Q6P1R4
BioGRIDDUS1L
STRING (EMBL)DUS1L
ZODIACDUS1L
Ontologies - Pathways
QuickGOQ6P1R4
Ontology : AmiGOtRNA dihydrouridine synthesis  tRNA dihydrouridine synthase activity  flavin adenine dinucleotide binding  oxidation-reduction process  
Ontology : EGO-EBItRNA dihydrouridine synthesis  tRNA dihydrouridine synthase activity  flavin adenine dinucleotide binding  oxidation-reduction process  
NDEx NetworkDUS1L
Atlas of Cancer Signalling NetworkDUS1L
Wikipedia pathwaysDUS1L
Orthology - Evolution
OrthoDB64118
Phylogenetic Trees/Animal Genes : TreeFamDUS1L
HOVERGENQ6P1R4
HOGENOMQ6P1R4
Homologs : HomoloGeneDUS1L
Homology/Alignments : Family Browser (UCSC)DUS1L
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDUS1L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DUS1L
dbVarDUS1L
ClinVarDUS1L
1000_GenomesDUS1L 
Exome Variant ServerDUS1L
ExAC (Exome Aggregation Consortium)DUS1L (select the gene name)
Genetic variants : HAPMAP64118
Genomic Variants (DGV)DUS1L [DGVbeta]
DECIPHER (Syndromes)17:80015748-80023697  
CONAN: Copy Number AnalysisDUS1L 
Mutations
ICGC Data PortalDUS1L 
TCGA Data PortalDUS1L 
Broad Tumor PortalDUS1L
OASIS PortalDUS1L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDUS1L  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDUS1L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DUS1L
DgiDB (Drug Gene Interaction Database)DUS1L
DoCM (Curated mutations)DUS1L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DUS1L (select a term)
intoGenDUS1L
Cancer3DDUS1L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDUS1L
Genetic Testing Registry DUS1L
NextProtQ6P1R4 [Medical]
TSGene64118
GENETestsDUS1L
Huge Navigator DUS1L [HugePedia]
snp3D : Map Gene to Disease64118
BioCentury BCIQDUS1L
ClinGenDUS1L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64118
Chemical/Pharm GKB GenePA142671936
Clinical trialDUS1L
Miscellaneous
canSAR (ICR)DUS1L (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDUS1L
EVEXDUS1L
GoPubMedDUS1L
iHOPDUS1L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:02:20 CET 2017

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