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DUSP23 (dual specificity phosphatase 23)

Identity

Alias_symbol (synonym)FLJ20442
DUSP25
Other aliasLDP-3
MOSP
VHZ
HGNC (Hugo) DUSP23
LocusID (NCBI) 54935
Atlas_Id 51596
Location 1q23.2  [Link to chromosome band 1q23]
Location_base_pair Starts at 159781003 and ends at 159782546 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DUSP23   21480
Cards
Entrez_Gene (NCBI)DUSP23  54935  dual specificity phosphatase 23
AliasesDUSP25; LDP-3; MOSP; VHZ
GeneCards (Weizmann)DUSP23
Ensembl hg19 (Hinxton)ENSG00000158716 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000158716 [Gene_View]  chr1:159781003-159782546 [Contig_View]  DUSP23 [Vega]
ICGC DataPortalENSG00000158716
TCGA cBioPortalDUSP23
AceView (NCBI)DUSP23
Genatlas (Paris)DUSP23
WikiGenes54935
SOURCE (Princeton)DUSP23
Genetics Home Reference (NIH)DUSP23
Genomic and cartography
GoldenPath hg38 (UCSC)DUSP23  -     chr1:159781003-159782546 +  1q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DUSP23  -     1q23.2   [Description]    (hg19-Feb_2009)
EnsemblDUSP23 - 1q23.2 [CytoView hg19]  DUSP23 - 1q23.2 [CytoView hg38]
Mapping of homologs : NCBIDUSP23 [Mapview hg19]  DUSP23 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB164404 AF086553 AK000449 BC001140 BG823348
RefSeq transcript (Entrez)NM_001319658 NM_001319659 NM_017823
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DUSP23
Cluster EST : UnigeneHs.425801 [ NCBI ]
CGAP (NCI)Hs.425801
Alternative Splicing GalleryENSG00000158716
Gene ExpressionDUSP23 [ NCBI-GEO ]   DUSP23 [ EBI - ARRAY_EXPRESS ]   DUSP23 [ SEEK ]   DUSP23 [ MEM ]
Gene Expression Viewer (FireBrowse)DUSP23 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54935
GTEX Portal (Tissue expression)DUSP23
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BVJ7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BVJ7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BVJ7
Splice isoforms : SwissVarQ9BVJ7
Catalytic activity : Enzyme3.1.3.16 [ Enzyme-Expasy ]   3.1.3.163.1.3.16 [ IntEnz-EBI ]   3.1.3.16 [ BRENDA ]   3.1.3.16 [ KEGG ]   
PhosPhoSitePlusQ9BVJ7
Domaine pattern : Prosite (Expaxy)TYR_PHOSPHATASE_1 (PS00383)    TYR_PHOSPHATASE_2 (PS50056)   
Domains : Interpro (EBI)Dual-sp_phosphatase_cat-dom    Prot-tyrosine_phosphatase-like    Tyr_Pase_AS    Tyr_Pase_cat    TYR_PHOSPHATASE_dom    TYR_PHOSPHATASE_DUAL_dom   
Domain families : Pfam (Sanger)DSPc (PF00782)   
Domain families : Pfam (NCBI)pfam00782   
Domain families : Smart (EMBL)DSPc (SM00195)  PTPc_motif (SM00404)  
Conserved Domain (NCBI)DUSP23
DMDM Disease mutations54935
Blocks (Seattle)DUSP23
PDB (SRS)2IMG    4ERC   
PDB (PDBSum)2IMG    4ERC   
PDB (IMB)2IMG    4ERC   
PDB (RSDB)2IMG    4ERC   
Structural Biology KnowledgeBase2IMG    4ERC   
SCOP (Structural Classification of Proteins)2IMG    4ERC   
CATH (Classification of proteins structures)2IMG    4ERC   
SuperfamilyQ9BVJ7
Human Protein AtlasENSG00000158716
Peptide AtlasQ9BVJ7
HPRD07908
IPIIPI00306353   
Protein Interaction databases
DIP (DOE-UCLA)Q9BVJ7
IntAct (EBI)Q9BVJ7
FunCoupENSG00000158716
BioGRIDDUSP23
STRING (EMBL)DUSP23
ZODIACDUSP23
Ontologies - Pathways
QuickGOQ9BVJ7
Ontology : AmiGOprotein serine/threonine phosphatase activity  protein tyrosine phosphatase activity  protein binding  nucleus  nucleoplasm  cytoplasm  cytosol  protein tyrosine/serine/threonine phosphatase activity  dephosphorylation  phosphatase activity  peptidyl-tyrosine dephosphorylation  extracellular exosome  
Ontology : EGO-EBIprotein serine/threonine phosphatase activity  protein tyrosine phosphatase activity  protein binding  nucleus  nucleoplasm  cytoplasm  cytosol  protein tyrosine/serine/threonine phosphatase activity  dephosphorylation  phosphatase activity  peptidyl-tyrosine dephosphorylation  extracellular exosome  
NDEx NetworkDUSP23
Atlas of Cancer Signalling NetworkDUSP23
Wikipedia pathwaysDUSP23
Orthology - Evolution
OrthoDB54935
GeneTree (enSembl)ENSG00000158716
Phylogenetic Trees/Animal Genes : TreeFamDUSP23
HOVERGENQ9BVJ7
HOGENOMQ9BVJ7
Homologs : HomoloGeneDUSP23
Homology/Alignments : Family Browser (UCSC)DUSP23
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDUSP23 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DUSP23
dbVarDUSP23
ClinVarDUSP23
1000_GenomesDUSP23 
Exome Variant ServerDUSP23
ExAC (Exome Aggregation Consortium)DUSP23 (select the gene name)
Genetic variants : HAPMAP54935
Genomic Variants (DGV)DUSP23 [DGVbeta]
DECIPHERDUSP23 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDUSP23 
Mutations
ICGC Data PortalDUSP23 
TCGA Data PortalDUSP23 
Broad Tumor PortalDUSP23
OASIS PortalDUSP23 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDUSP23  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDUSP23
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DUSP23
DgiDB (Drug Gene Interaction Database)DUSP23
DoCM (Curated mutations)DUSP23 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DUSP23 (select a term)
intoGenDUSP23
Cancer3DDUSP23(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDUSP23
Genetic Testing Registry DUSP23
NextProtQ9BVJ7 [Medical]
TSGene54935
GENETestsDUSP23
Target ValidationDUSP23
Huge Navigator DUSP23 [HugePedia]
snp3D : Map Gene to Disease54935
BioCentury BCIQDUSP23
ClinGenDUSP23
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54935
Chemical/Pharm GKB GenePA134983082
Clinical trialDUSP23
Miscellaneous
canSAR (ICR)DUSP23 (select the gene name)
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDUSP23
EVEXDUSP23
GoPubMedDUSP23
iHOPDUSP23
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:31:54 CEST 2017

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