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DYDC1 (DPY30 domain containing 1)

Identity

Alias_symbol (synonym)bA36D19.5
DPY30D1
Other alias
HGNC (Hugo) DYDC1
LocusID (NCBI) 143241
Atlas_Id 62685
Location 10q23.1  [Link to chromosome band 10q23]
Location_base_pair Starts at 82095861 and ends at 82116514 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DYDC1   23460
Cards
Entrez_Gene (NCBI)DYDC1  143241  DPY30 domain containing 1
AliasesDPY30D1
GeneCards (Weizmann)DYDC1
Ensembl hg19 (Hinxton)ENSG00000170788 [Gene_View]  chr10:82095861-82116514 [Contig_View]  DYDC1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000170788 [Gene_View]  chr10:82095861-82116514 [Contig_View]  DYDC1 [Vega]
ICGC DataPortalENSG00000170788
TCGA cBioPortalDYDC1
AceView (NCBI)DYDC1
Genatlas (Paris)DYDC1
WikiGenes143241
SOURCE (Princeton)DYDC1
Genetics Home Reference (NIH)DYDC1
Genomic and cartography
GoldenPath hg19 (UCSC)DYDC1  -     chr10:82095861-82116514 -  10q23.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DYDC1  -     10q23.1   [Description]    (hg38-Dec_2013)
EnsemblDYDC1 - 10q23.1 [CytoView hg19]  DYDC1 - 10q23.1 [CytoView hg38]
Mapping of homologs : NCBIDYDC1 [Mapview hg19]  DYDC1 [Mapview hg38]
OMIM615154   
Gene and transcription
Genbank (Entrez)AK125908 AK292542 BC019250 BI828082 EU831814
RefSeq transcript (Entrez)NM_001269053 NM_138812
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)DYDC1
Cluster EST : UnigeneHs.407751 [ NCBI ]
CGAP (NCI)Hs.407751
Alternative Splicing GalleryENSG00000170788
Gene ExpressionDYDC1 [ NCBI-GEO ]   DYDC1 [ EBI - ARRAY_EXPRESS ]   DYDC1 [ SEEK ]   DYDC1 [ MEM ]
Gene Expression Viewer (FireBrowse)DYDC1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)143241
GTEX Portal (Tissue expression)DYDC1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WWB3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WWB3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WWB3
Splice isoforms : SwissVarQ8WWB3
PhosPhoSitePlusQ8WWB3
Domains : Interpro (EBI)Dpy-30_motif   
Domain families : Pfam (Sanger)Dpy-30 (PF05186)   
Domain families : Pfam (NCBI)pfam05186   
Conserved Domain (NCBI)DYDC1
DMDM Disease mutations143241
Blocks (Seattle)DYDC1
SuperfamilyQ8WWB3
Human Protein AtlasENSG00000170788
Peptide AtlasQ8WWB3
HPRD14062
IPIIPI00940575   IPI00745374   IPI00646399   IPI00646928   
Protein Interaction databases
DIP (DOE-UCLA)Q8WWB3
IntAct (EBI)Q8WWB3
FunCoupENSG00000170788
BioGRIDDYDC1
STRING (EMBL)DYDC1
ZODIACDYDC1
Ontologies - Pathways
QuickGOQ8WWB3
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkDYDC1
Atlas of Cancer Signalling NetworkDYDC1
Wikipedia pathwaysDYDC1
Orthology - Evolution
OrthoDB143241
GeneTree (enSembl)ENSG00000170788
Phylogenetic Trees/Animal Genes : TreeFamDYDC1
HOVERGENQ8WWB3
HOGENOMQ8WWB3
Homologs : HomoloGeneDYDC1
Homology/Alignments : Family Browser (UCSC)DYDC1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDYDC1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DYDC1
dbVarDYDC1
ClinVarDYDC1
1000_GenomesDYDC1 
Exome Variant ServerDYDC1
ExAC (Exome Aggregation Consortium)DYDC1 (select the gene name)
Genetic variants : HAPMAP143241
Genomic Variants (DGV)DYDC1 [DGVbeta]
DECIPHER (Syndromes)10:82095861-82116514  ENSG00000170788
CONAN: Copy Number AnalysisDYDC1 
Mutations
ICGC Data PortalDYDC1 
TCGA Data PortalDYDC1 
Broad Tumor PortalDYDC1
OASIS PortalDYDC1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDYDC1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDYDC1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DYDC1
DgiDB (Drug Gene Interaction Database)DYDC1
DoCM (Curated mutations)DYDC1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DYDC1 (select a term)
intoGenDYDC1
Cancer3DDYDC1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615154   
Orphanet
MedgenDYDC1
Genetic Testing Registry DYDC1
NextProtQ8WWB3 [Medical]
TSGene143241
GENETestsDYDC1
Huge Navigator DYDC1 [HugePedia]
snp3D : Map Gene to Disease143241
BioCentury BCIQDYDC1
ClinGenDYDC1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD143241
Chemical/Pharm GKB GenePA134972260
Clinical trialDYDC1
Miscellaneous
canSAR (ICR)DYDC1 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDYDC1
EVEXDYDC1
GoPubMedDYDC1
iHOPDYDC1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:02:23 CET 2017

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