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DYDC2 (DPY30 domain containing 2)

Identity

Alias (NCBI)-
HGNC (Hugo) DYDC2
HGNC Alias symbbA36D19.6
MGC16186
LocusID (NCBI) 84332
Atlas_Id 62686
Location 10q23.1  [Link to chromosome band 10q23]
Location_base_pair Starts at 80356781 and ends at 80368073 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TSPAN14 (10q23.1) / DYDC2 (10q23.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)DYDC2   23468
Cards
Entrez_Gene (NCBI)DYDC2    DPY30 domain containing 2
Aliases
GeneCards (Weizmann)DYDC2
Ensembl hg19 (Hinxton)ENSG00000133665 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000133665 [Gene_View]  ENSG00000133665 [Sequence]  chr10:80356781-80368073 [Contig_View]  DYDC2 [Vega]
ICGC DataPortalENSG00000133665
TCGA cBioPortalDYDC2
AceView (NCBI)DYDC2
Genatlas (Paris)DYDC2
SOURCE (Princeton)DYDC2
Genetics Home Reference (NIH)DYDC2
Genomic and cartography
GoldenPath hg38 (UCSC)DYDC2  -     chr10:80356781-80368073 +  10q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DYDC2  -     10q23.1   [Description]    (hg19-Feb_2009)
GoldenPathDYDC2 - 10q23.1 [CytoView hg19]  DYDC2 - 10q23.1 [CytoView hg38]
ImmunoBaseENSG00000133665
Genome Data Viewer NCBIDYDC2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK093378 BC007374 BC018606 BQ229460 DA590784
RefSeq transcript (Entrez)NM_001270041 NM_001270042 NM_032372
Consensus coding sequences : CCDS (NCBI)DYDC2
Gene ExpressionDYDC2 [ NCBI-GEO ]   DYDC2 [ EBI - ARRAY_EXPRESS ]   DYDC2 [ SEEK ]   DYDC2 [ MEM ]
Gene Expression Viewer (FireBrowse)DYDC2 [ Firebrowse - Broad ]
GenevisibleExpression of DYDC2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84332
GTEX Portal (Tissue expression)DYDC2
Human Protein AtlasENSG00000133665-DYDC2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96IM9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96IM9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96IM9
PhosPhoSitePlusQ96IM9
Domains : Interpro (EBI)Dpy-30_motif    Sdc1/DPY30   
Domain families : Pfam (Sanger)Dpy-30 (PF05186)   
Domain families : Pfam (NCBI)pfam05186   
Conserved Domain (NCBI)DYDC2
SuperfamilyQ96IM9
AlphaFold pdb e-kbQ96IM9   
Human Protein Atlas [tissue]ENSG00000133665-DYDC2 [tissue]
HPRD11311
Protein Interaction databases
DIP (DOE-UCLA)Q96IM9
IntAct (EBI)Q96IM9
BioGRIDDYDC2
STRING (EMBL)DYDC2
ZODIACDYDC2
Ontologies - Pathways
QuickGOQ96IM9
Ontology : AmiGOchromosome, telomeric region  protein binding  chromatin silencing at telomere  MLL3/4 complex  Set1C/COMPASS complex  histone H3-K4 methylation  
Ontology : EGO-EBIchromosome, telomeric region  protein binding  chromatin silencing at telomere  MLL3/4 complex  Set1C/COMPASS complex  histone H3-K4 methylation  
NDEx NetworkDYDC2
Atlas of Cancer Signalling NetworkDYDC2
Wikipedia pathwaysDYDC2
Orthology - Evolution
OrthoDB84332
GeneTree (enSembl)ENSG00000133665
Phylogenetic Trees/Animal Genes : TreeFamDYDC2
Homologs : HomoloGeneDYDC2
Homology/Alignments : Family Browser (UCSC)DYDC2
Gene fusions - Rearrangements
Fusion : QuiverDYDC2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDYDC2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DYDC2
dbVarDYDC2
ClinVarDYDC2
MonarchDYDC2
1000_GenomesDYDC2 
Exome Variant ServerDYDC2
GNOMAD BrowserENSG00000133665
Varsome BrowserDYDC2
ACMGDYDC2 variants
VarityQ96IM9
Genomic Variants (DGV)DYDC2 [DGVbeta]
DECIPHERDYDC2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDYDC2 
Mutations
ICGC Data PortalDYDC2 
TCGA Data PortalDYDC2 
Broad Tumor PortalDYDC2
OASIS PortalDYDC2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDYDC2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DDYDC2
Mutations and Diseases : HGMDDYDC2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaDYDC2
DgiDB (Drug Gene Interaction Database)DYDC2
DoCM (Curated mutations)DYDC2
CIViC (Clinical Interpretations of Variants in Cancer)DYDC2
Cancer3DDYDC2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETDYDC2
MedgenDYDC2
Genetic Testing Registry DYDC2
NextProtQ96IM9 [Medical]
GENETestsDYDC2
Target ValidationDYDC2
Huge Navigator DYDC2 [HugePedia]
ClinGenDYDC2
Clinical trials, drugs, therapy
MyCancerGenomeDYDC2
Protein Interactions : CTDDYDC2
Pharm GKB GenePA134988160
PharosQ96IM9
Clinical trialDYDC2
Miscellaneous
canSAR (ICR)DYDC2
HarmonizomeDYDC2
DataMed IndexDYDC2
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXDYDC2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:48:32 CEST 2021

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