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DYM (dymeclin)

Identity

Alias (NCBI)DMC
SMC
HGNC (Hugo) DYM
HGNC Alias symbFLJ20071
DMC
SMC
LocusID (NCBI) 54808
Atlas_Id 62687
Location 18q21.1  [Link to chromosome band 18q21]
Location_base_pair Starts at 49036387 and ends at 49460645 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DAZAP1 (19p13.3) / DYM (18q21.1)DYM (18q21.1) / C10orf105 (10q22.1)DYM (18q21.1) / CTIF (18q21.1)
DYM (18q21.1) / CYP19A1 (15q21.2)DYM (18q21.1) / DAZAP1 (19p13.3)DYM (18q21.1) / MBD2 (18q21.2)
DYM (18q21.1) / MYO5B (18q21.1)DYM (18q21.1) / SLC14A2 (18q12.3)DYM (18q21.1) / TMC7 (16p12.3)
EGFR (7p11.2) / DYM (18q21.1)MYO5B (18q21.1) / DYM (18q21.1)SMAD7 (18q21.1) / DYM (18q21.1)
TNPO3 (7q32.1) / DYM (18q21.1)DYM MYO5BDYM CTIF
DYM SLC14A2DYM TMC7MYO5B DYM
SMAD7 DYMEGFR DYMTNPO3 DYM

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)DYM   21317
Cards
Entrez_Gene (NCBI)DYM    dymeclin
AliasesDMC; SMC
GeneCards (Weizmann)DYM
Ensembl hg19 (Hinxton)ENSG00000141627 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000141627 [Gene_View]  ENSG00000141627 [Sequence]  chr18:49036387-49460645 [Contig_View]  DYM [Vega]
ICGC DataPortalENSG00000141627
TCGA cBioPortalDYM
AceView (NCBI)DYM
Genatlas (Paris)DYM
SOURCE (Princeton)DYM
Genetics Home Reference (NIH)DYM
Genomic and cartography
GoldenPath hg38 (UCSC)DYM  -     chr18:49036387-49460645 -  18q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DYM  -     18q21.1   [Description]    (hg19-Feb_2009)
GoldenPathDYM - 18q21.1 [CytoView hg19]  DYM - 18q21.1 [CytoView hg38]
ImmunoBaseENSG00000141627
Genome Data Viewer NCBIDYM [Mapview hg19]  
OMIM223800   607326   607461   
Gene and transcription
Genbank (Entrez)AI753005 AK000078 AK074611 AK091256 AK225205
RefSeq transcript (Entrez)NM_001353210 NM_001353211 NM_001353212 NM_001353213 NM_001353214 NM_001353215 NM_001353216 NM_001374428 NM_001374429 NM_001374430 NM_001374431 NM_001374432 NM_001374433 NM_001374434 NM_001374435 NM_001374436 NM_001374437 NM_001374438 NM_001374439 NM_001374440 NM_001374441 NM_001374442 NM_001374443 NM_001374444 NM_017653
Consensus coding sequences : CCDS (NCBI)DYM
Gene ExpressionDYM [ NCBI-GEO ]   DYM [ EBI - ARRAY_EXPRESS ]   DYM [ SEEK ]   DYM [ MEM ]
Gene Expression Viewer (FireBrowse)DYM [ Firebrowse - Broad ]
GenevisibleExpression of DYM in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54808
GTEX Portal (Tissue expression)DYM
Human Protein AtlasENSG00000141627-DYM [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7RTS9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7RTS9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7RTS9
PhosPhoSitePlusQ7RTS9
Domains : Interpro (EBI)Dymeclin   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DYM
SuperfamilyQ7RTS9
AlphaFold pdb e-kbQ7RTS9   
Human Protein Atlas [tissue]ENSG00000141627-DYM [tissue]
HPRD08469
Protein Interaction databases
DIP (DOE-UCLA)Q7RTS9
IntAct (EBI)Q7RTS9
BioGRIDDYM
STRING (EMBL)DYM
ZODIACDYM
Ontologies - Pathways
QuickGOQ7RTS9
Ontology : AmiGOprotein binding  cytoplasm  Golgi apparatus  Golgi apparatus  Golgi organization  Golgi organization  membrane  enzyme binding  bone development  
Ontology : EGO-EBIprotein binding  cytoplasm  Golgi apparatus  Golgi apparatus  Golgi organization  Golgi organization  membrane  enzyme binding  bone development  
NDEx NetworkDYM
Atlas of Cancer Signalling NetworkDYM
Wikipedia pathwaysDYM
Orthology - Evolution
OrthoDB54808
GeneTree (enSembl)ENSG00000141627
Phylogenetic Trees/Animal Genes : TreeFamDYM
Homologs : HomoloGeneDYM
Homology/Alignments : Family Browser (UCSC)DYM
Gene fusions - Rearrangements
Fusion : QuiverDYM
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDYM [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DYM
dbVarDYM
ClinVarDYM
MonarchDYM
1000_GenomesDYM 
Exome Variant ServerDYM
GNOMAD BrowserENSG00000141627
Varsome BrowserDYM
ACMGDYM variants
VarityQ7RTS9
Genomic Variants (DGV)DYM [DGVbeta]
DECIPHERDYM [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDYM 
Mutations
ICGC Data PortalDYM 
TCGA Data PortalDYM 
Broad Tumor PortalDYM
OASIS PortalDYM [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDYM  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DDYM
Mutations and Diseases : HGMDDYM
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaDYM
DgiDB (Drug Gene Interaction Database)DYM
DoCM (Curated mutations)DYM
CIViC (Clinical Interpretations of Variants in Cancer)DYM
Cancer3DDYM
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM223800    607326    607461   
Orphanet473    18019   
DisGeNETDYM
MedgenDYM
Genetic Testing Registry DYM
NextProtQ7RTS9 [Medical]
GENETestsDYM
Target ValidationDYM
Huge Navigator DYM [HugePedia]
ClinGenDYM
Clinical trials, drugs, therapy
MyCancerGenomeDYM
Protein Interactions : CTDDYM
Pharm GKB GenePA134879547
PharosQ7RTS9
Clinical trialDYM
Miscellaneous
canSAR (ICR)DYM
HarmonizomeDYM
DataMed IndexDYM
Probes
Litterature
PubMed36 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXDYM
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:48:32 CEST 2021

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