Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

DYNAP (dynactin associated protein)

Identity

Alias_namesC18orf26
chromosome 18 open reading frame 26
Alias_symbol (synonym)FLJ39106
Other alias
HGNC (Hugo) DYNAP
LocusID (NCBI) 284254
Atlas_Id 52950
Location 18q21.2  [Link to chromosome band 18q21]
Location_base_pair Starts at 52254990 and ends at 52266724 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DYNAP   26808
Cards
Entrez_Gene (NCBI)DYNAP  284254  dynactin associated protein
AliasesC18orf26
GeneCards (Weizmann)DYNAP
Ensembl hg19 (Hinxton)ENSG00000178690 [Gene_View]  chr18:52254990-52266724 [Contig_View]  DYNAP [Vega]
Ensembl hg38 (Hinxton)ENSG00000178690 [Gene_View]  chr18:52254990-52266724 [Contig_View]  DYNAP [Vega]
ICGC DataPortalENSG00000178690
TCGA cBioPortalDYNAP
AceView (NCBI)DYNAP
Genatlas (Paris)DYNAP
WikiGenes284254
SOURCE (Princeton)DYNAP
Genetics Home Reference (NIH)DYNAP
Genomic and cartography
GoldenPath hg19 (UCSC)DYNAP  -     chr18:52254990-52266724 +  18q21.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DYNAP  -     18q21.2   [Description]    (hg38-Dec_2013)
EnsemblDYNAP - 18q21.2 [CytoView hg19]  DYNAP - 18q21.2 [CytoView hg38]
Mapping of homologs : NCBIDYNAP [Mapview hg19]  DYNAP [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096425
RefSeq transcript (Entrez)NM_001307955 NM_173629
RefSeq genomic (Entrez)NC_000018 NC_018929 NT_010966 NW_004929411
Consensus coding sequences : CCDS (NCBI)DYNAP
Cluster EST : UnigeneHs.376146 [ NCBI ]
CGAP (NCI)Hs.376146
Alternative Splicing GalleryENSG00000178690
Gene ExpressionDYNAP [ NCBI-GEO ]   DYNAP [ EBI - ARRAY_EXPRESS ]   DYNAP [ SEEK ]   DYNAP [ MEM ]
Gene Expression Viewer (FireBrowse)DYNAP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284254
GTEX Portal (Tissue expression)DYNAP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N1N2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N1N2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N1N2
Splice isoforms : SwissVarQ8N1N2
PhosPhoSitePlusQ8N1N2
Domains : Interpro (EBI)CLLAC   
Domain families : Pfam (Sanger)CLLAC (PF15675)   
Domain families : Pfam (NCBI)pfam15675   
Conserved Domain (NCBI)DYNAP
DMDM Disease mutations284254
Blocks (Seattle)DYNAP
SuperfamilyQ8N1N2
Human Protein AtlasENSG00000178690
Peptide AtlasQ8N1N2
HPRD08251
IPIIPI00166204   
Protein Interaction databases
DIP (DOE-UCLA)Q8N1N2
IntAct (EBI)Q8N1N2
FunCoupENSG00000178690
BioGRIDDYNAP
STRING (EMBL)DYNAP
ZODIACDYNAP
Ontologies - Pathways
QuickGOQ8N1N2
Ontology : AmiGOGolgi membrane  protein binding  Golgi apparatus  plasma membrane  positive regulation of cell proliferation  integral component of membrane  activation of protein kinase B activity  regulation of apoptotic process  cellular response to ergosterol  
Ontology : EGO-EBIGolgi membrane  protein binding  Golgi apparatus  plasma membrane  positive regulation of cell proliferation  integral component of membrane  activation of protein kinase B activity  regulation of apoptotic process  cellular response to ergosterol  
NDEx NetworkDYNAP
Atlas of Cancer Signalling NetworkDYNAP
Wikipedia pathwaysDYNAP
Orthology - Evolution
OrthoDB284254
GeneTree (enSembl)ENSG00000178690
Phylogenetic Trees/Animal Genes : TreeFamDYNAP
HOVERGENQ8N1N2
HOGENOMQ8N1N2
Homologs : HomoloGeneDYNAP
Homology/Alignments : Family Browser (UCSC)DYNAP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDYNAP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DYNAP
dbVarDYNAP
ClinVarDYNAP
1000_GenomesDYNAP 
Exome Variant ServerDYNAP
ExAC (Exome Aggregation Consortium)DYNAP (select the gene name)
Genetic variants : HAPMAP284254
Genomic Variants (DGV)DYNAP [DGVbeta]
DECIPHER (Syndromes)18:52254990-52266724  ENSG00000178690
CONAN: Copy Number AnalysisDYNAP 
Mutations
ICGC Data PortalDYNAP 
TCGA Data PortalDYNAP 
Broad Tumor PortalDYNAP
OASIS PortalDYNAP [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDDYNAP
BioMutasearch DYNAP
DgiDB (Drug Gene Interaction Database)DYNAP
DoCM (Curated mutations)DYNAP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DYNAP (select a term)
intoGenDYNAP
Cancer3DDYNAP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDYNAP
Genetic Testing Registry DYNAP
NextProtQ8N1N2 [Medical]
TSGene284254
GENETestsDYNAP
Huge Navigator DYNAP [HugePedia]
snp3D : Map Gene to Disease284254
BioCentury BCIQDYNAP
ClinGenDYNAP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284254
Chemical/Pharm GKB GenePA134946407
Clinical trialDYNAP
Miscellaneous
canSAR (ICR)DYNAP (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDYNAP
EVEXDYNAP
GoPubMedDYNAP
iHOPDYNAP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 30 14:59:34 CEST 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.