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DYNLT2 (dynein light chain Tctex-type 2)

Identity

Alias (NCBI)TCTE3
TCTEX1D3
TCTEX2
Tctex4
HGNC (Hugo) DYNLT2
HGNC Alias symbTCTEX1D3
TCTEX2
Tctex4
HGNC Alias nameTctex1 domain containing 3
HGNC Previous nameTCTE3
HGNC Previous namet-complex-associated-testis-expressed 3
LocusID (NCBI) 6991
Atlas_Id 57615
Location 6q27  [Link to chromosome band 6q27]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

 

Nomenclature
HGNC (Hugo)DYNLT2   11695
Cards
Entrez_Gene (NCBI)DYNLT2    dynein light chain Tctex-type 2
AliasesTCTE3; TCTEX1D3; TCTEX2; Tctex4
GeneCards (Weizmann)DYNLT2
Ensembl hg19 (Hinxton)ENSG00000184786 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184786 [Gene_View]  ENSG00000184786 [Sequence]  - [Contig_View]  DYNLT2 [Vega]
ICGC DataPortalENSG00000184786
TCGA cBioPortalDYNLT2
AceView (NCBI)DYNLT2
Genatlas (Paris)DYNLT2
SOURCE (Princeton)DYNLT2
Genetics Home Reference (NIH)DYNLT2
Genomic and cartography
GoldenPath hg38 (UCSC)DYNLT2  -  
GoldenPath hg19 (UCSC)DYNLT2  -  
GoldenPathDYNLT2 - [CytoView hg19]  DYNLT2 - [CytoView hg38]
ImmunoBaseENSG00000184786
Genome Data Viewer NCBIDYNLT2 [Mapview hg19]  
OMIM186977   
Gene and transcription
Genbank (Entrez)AF519569 AK023627 BC043594 BC053352 BC063455
RefSeq transcript (Entrez)NM_174910
Consensus coding sequences : CCDS (NCBI)DYNLT2
Gene ExpressionDYNLT2 [ NCBI-GEO ]   DYNLT2 [ EBI - ARRAY_EXPRESS ]   DYNLT2 [ SEEK ]   DYNLT2 [ MEM ]
Gene Expression Viewer (FireBrowse)DYNLT2 [ Firebrowse - Broad ]
GenevisibleExpression of DYNLT2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6991
GTEX Portal (Tissue expression)DYNLT2
Human Protein AtlasENSG00000184786-DYNLT2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IZS6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IZS6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IZS6
PhosPhoSitePlusQ8IZS6
Domains : Interpro (EBI)Tctex-1-like    Tctex-1-like_sf   
Domain families : Pfam (Sanger)Tctex-1 (PF03645)   
Domain families : Pfam (NCBI)pfam03645   
Conserved Domain (NCBI)DYNLT2
SuperfamilyQ8IZS6
AlphaFold pdb e-kbQ8IZS6   
Human Protein Atlas [tissue]ENSG00000184786-DYNLT2 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q8IZS6
IntAct (EBI)Q8IZS6
BioGRIDDYNLT2
STRING (EMBL)DYNLT2
ZODIACDYNLT2
Ontologies - Pathways
QuickGOQ8IZS6
Ontology : AmiGOprotein binding  cytoplasm  microtubule  membrane  dynein complex  
Ontology : EGO-EBIprotein binding  cytoplasm  microtubule  membrane  dynein complex  
NDEx NetworkDYNLT2
Atlas of Cancer Signalling NetworkDYNLT2
Wikipedia pathwaysDYNLT2
Orthology - Evolution
OrthoDB6991
GeneTree (enSembl)ENSG00000184786
Phylogenetic Trees/Animal Genes : TreeFamDYNLT2
Homologs : HomoloGeneDYNLT2
Homology/Alignments : Family Browser (UCSC)DYNLT2
Gene fusions - Rearrangements
Fusion : QuiverDYNLT2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDYNLT2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DYNLT2
dbVarDYNLT2
ClinVarDYNLT2
MonarchDYNLT2
1000_GenomesDYNLT2 
Exome Variant ServerDYNLT2
GNOMAD BrowserENSG00000184786
Varsome BrowserDYNLT2
ACMGDYNLT2 variants
VarityQ8IZS6
Genomic Variants (DGV)DYNLT2 [DGVbeta]
DECIPHERDYNLT2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDYNLT2 
Mutations
ICGC Data PortalDYNLT2 
TCGA Data PortalDYNLT2 
Broad Tumor PortalDYNLT2
OASIS PortalDYNLT2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDDYNLT2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaDYNLT2
DgiDB (Drug Gene Interaction Database)DYNLT2
DoCM (Curated mutations)DYNLT2
CIViC (Clinical Interpretations of Variants in Cancer)DYNLT2
Cancer3DDYNLT2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM186977   
Orphanet
DisGeNETDYNLT2
MedgenDYNLT2
Genetic Testing Registry DYNLT2
NextProtQ8IZS6 [Medical]
GENETestsDYNLT2
Target ValidationDYNLT2
Huge Navigator DYNLT2 [HugePedia]
ClinGenDYNLT2
Clinical trials, drugs, therapy
MyCancerGenomeDYNLT2
Protein Interactions : CTDDYNLT2
Pharm GKB GenePA36415
PharosQ8IZS6
Clinical trialDYNLT2
Miscellaneous
canSAR (ICR)DYNLT2
HarmonizomeDYNLT2
DataMed IndexDYNLT2
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXDYNLT2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:07:33 CEST 2021

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