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DYTN (dystrotelin)

Identity

Other alias-
HGNC (Hugo) DYTN
LocusID (NCBI) 391475
Atlas_Id 62696
Location 2q33.3  [Link to chromosome band 2q33]
Location_base_pair Starts at 206651621 and ends at 206718396 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
THADA (2p21) / DYTN (2q33.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DYTN   23279
Cards
Entrez_Gene (NCBI)DYTN  391475  dystrotelin
Aliases
GeneCards (Weizmann)DYTN
Ensembl hg19 (Hinxton)ENSG00000232125 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232125 [Gene_View]  chr2:206651621-206718396 [Contig_View]  DYTN [Vega]
ICGC DataPortalENSG00000232125
TCGA cBioPortalDYTN
AceView (NCBI)DYTN
Genatlas (Paris)DYTN
WikiGenes391475
SOURCE (Princeton)DYTN
Genetics Home Reference (NIH)DYTN
Genomic and cartography
GoldenPath hg38 (UCSC)DYTN  -     chr2:206651621-206718396 -  2q33.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DYTN  -     2q33.3   [Description]    (hg19-Feb_2009)
EnsemblDYTN - 2q33.3 [CytoView hg19]  DYTN - 2q33.3 [CytoView hg38]
Mapping of homologs : NCBIDYTN [Mapview hg19]  DYTN [Mapview hg38]
Gene and transcription
Genbank (Entrez)DQ516347
RefSeq transcript (Entrez)NM_001093730
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DYTN
Cluster EST : UnigeneHs.640667 [ NCBI ]
CGAP (NCI)Hs.640667
Alternative Splicing GalleryENSG00000232125
Gene ExpressionDYTN [ NCBI-GEO ]   DYTN [ EBI - ARRAY_EXPRESS ]   DYTN [ SEEK ]   DYTN [ MEM ]
Gene Expression Viewer (FireBrowse)DYTN [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)391475
GTEX Portal (Tissue expression)DYTN
Human Protein AtlasENSG00000232125-DYTN [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA2CJ06   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA2CJ06  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA2CJ06
Splice isoforms : SwissVarA2CJ06
PhosPhoSitePlusA2CJ06
Domaine pattern : Prosite (Expaxy)ZF_ZZ_1 (PS01357)    ZF_ZZ_2 (PS50135)   
Domains : Interpro (EBI)EF-hand-dom_pair    EF-hand_dom_typ1    EF-hand_dom_typ2    Znf_ZZ   
Domain families : Pfam (Sanger)EF-hand_2 (PF09068)    EF-hand_3 (PF09069)    ZZ (PF00569)   
Domain families : Pfam (NCBI)pfam09068    pfam09069    pfam00569   
Domain families : Smart (EMBL)ZnF_ZZ (SM00291)  
Conserved Domain (NCBI)DYTN
DMDM Disease mutations391475
Blocks (Seattle)DYTN
SuperfamilyA2CJ06
Human Protein Atlas [tissue]ENSG00000232125-DYTN [tissue]
Peptide AtlasA2CJ06
IPIIPI00827799   
Protein Interaction databases
DIP (DOE-UCLA)A2CJ06
IntAct (EBI)A2CJ06
FunCoupENSG00000232125
BioGRIDDYTN
STRING (EMBL)DYTN
ZODIACDYTN
Ontologies - Pathways
QuickGOA2CJ06
Ontology : AmiGOplasma membrane  zinc ion binding  
Ontology : EGO-EBIplasma membrane  zinc ion binding  
NDEx NetworkDYTN
Atlas of Cancer Signalling NetworkDYTN
Wikipedia pathwaysDYTN
Orthology - Evolution
OrthoDB391475
GeneTree (enSembl)ENSG00000232125
Phylogenetic Trees/Animal Genes : TreeFamDYTN
HOVERGENA2CJ06
HOGENOMA2CJ06
Homologs : HomoloGeneDYTN
Homology/Alignments : Family Browser (UCSC)DYTN
Gene fusions - Rearrangements
Fusion: Tumor Portal DYTN
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDYTN [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DYTN
dbVarDYTN
ClinVarDYTN
1000_GenomesDYTN 
Exome Variant ServerDYTN
ExAC (Exome Aggregation Consortium)ENSG00000232125
GNOMAD BrowserENSG00000232125
Genetic variants : HAPMAP391475
Genomic Variants (DGV)DYTN [DGVbeta]
DECIPHERDYTN [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDYTN 
Mutations
ICGC Data PortalDYTN 
TCGA Data PortalDYTN 
Broad Tumor PortalDYTN
OASIS PortalDYTN [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDYTN  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDYTN
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DYTN
DgiDB (Drug Gene Interaction Database)DYTN
DoCM (Curated mutations)DYTN (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DYTN (select a term)
intoGenDYTN
Cancer3DDYTN(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDYTN
Genetic Testing Registry DYTN
NextProtA2CJ06 [Medical]
TSGene391475
GENETestsDYTN
Target ValidationDYTN
Huge Navigator DYTN [HugePedia]
snp3D : Map Gene to Disease391475
BioCentury BCIQDYTN
ClinGenDYTN
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD391475
Chemical/Pharm GKB GenePA162384136
Clinical trialDYTN
Miscellaneous
canSAR (ICR)DYTN (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDYTN
EVEXDYTN
GoPubMedDYTN
iHOPDYTN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Nov 9 11:45:20 CET 2017

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