Atlas of Genetics and Cytogenetics in Oncology and Haematology


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DZIP1L (DAZ interacting zinc finger protein 1-like)

Identity

Alias_namesDAZ interacting protein 1-like
DAZ interacting zinc finger protein 1-like
Alias_symbol (synonym)FLJ32844
DZIP2
Other alias
HGNC (Hugo) DZIP1L
LocusID (NCBI) 199221
Atlas_Id 62700
Location 3q22.3  [Link to chromosome band 3q22]
Location_base_pair Starts at 137787825 and ends at 137832322 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ADCY2 (5p15.31) / DZIP1L (3q22.3)ANXA2P3 (10q21.3) / DZIP1L (3q22.3)MBNL1 (3q25.1) / DZIP1L (3q22.3)
PLXNA1 (3q21.3) / DZIP1L (3q22.3)UBA52 (19p13.11) / DZIP1L (3q22.3)MBNL1 DZIP1L
PLXNA1 DZIP1L

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DZIP1L   26551
Cards
Entrez_Gene (NCBI)DZIP1L  199221  DAZ interacting zinc finger protein 1-like
AliasesDZIP2
GeneCards (Weizmann)DZIP1L
Ensembl hg19 (Hinxton)ENSG00000158163 [Gene_View]  chr3:137787825-137832322 [Contig_View]  DZIP1L [Vega]
Ensembl hg38 (Hinxton)ENSG00000158163 [Gene_View]  chr3:137787825-137832322 [Contig_View]  DZIP1L [Vega]
ICGC DataPortalENSG00000158163
TCGA cBioPortalDZIP1L
AceView (NCBI)DZIP1L
Genatlas (Paris)DZIP1L
WikiGenes199221
SOURCE (Princeton)DZIP1L
Genetics Home Reference (NIH)DZIP1L
Genomic and cartography
GoldenPath hg19 (UCSC)DZIP1L  -     chr3:137787825-137832322 -  3q22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DZIP1L  -     3q22.3   [Description]    (hg38-Dec_2013)
EnsemblDZIP1L - 3q22.3 [CytoView hg19]  DZIP1L - 3q22.3 [CytoView hg38]
Mapping of homologs : NCBIDZIP1L [Mapview hg19]  DZIP1L [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI283643 AK057406 BC033308 BQ424578 DR001616
RefSeq transcript (Entrez)NM_001170538 NM_173543
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)DZIP1L
Cluster EST : UnigeneHs.351403 [ NCBI ]
CGAP (NCI)Hs.351403
Alternative Splicing GalleryENSG00000158163
Gene ExpressionDZIP1L [ NCBI-GEO ]   DZIP1L [ EBI - ARRAY_EXPRESS ]   DZIP1L [ SEEK ]   DZIP1L [ MEM ]
Gene Expression Viewer (FireBrowse)DZIP1L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)199221
GTEX Portal (Tissue expression)DZIP1L
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IYY4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IYY4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IYY4
Splice isoforms : SwissVarQ8IYY4
PhosPhoSitePlusQ8IYY4
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)DZIP1L
DMDM Disease mutations199221
Blocks (Seattle)DZIP1L
SuperfamilyQ8IYY4
Human Protein AtlasENSG00000158163
Peptide AtlasQ8IYY4
HPRD08145
IPIIPI00217923   IPI00796040   IPI00947269   IPI00976823   IPI00946939   
Protein Interaction databases
DIP (DOE-UCLA)Q8IYY4
IntAct (EBI)Q8IYY4
FunCoupENSG00000158163
BioGRIDDZIP1L
STRING (EMBL)DZIP1L
ZODIACDZIP1L
Ontologies - Pathways
QuickGOQ8IYY4
Ontology : AmiGOprotein binding  centriole  ciliary basal body  cilium assembly  metal ion binding  
Ontology : EGO-EBIprotein binding  centriole  ciliary basal body  cilium assembly  metal ion binding  
NDEx NetworkDZIP1L
Atlas of Cancer Signalling NetworkDZIP1L
Wikipedia pathwaysDZIP1L
Orthology - Evolution
OrthoDB199221
GeneTree (enSembl)ENSG00000158163
Phylogenetic Trees/Animal Genes : TreeFamDZIP1L
HOVERGENQ8IYY4
HOGENOMQ8IYY4
Homologs : HomoloGeneDZIP1L
Homology/Alignments : Family Browser (UCSC)DZIP1L
Gene fusions - Rearrangements
Fusion: TCGAMBNL1 DZIP1L
Fusion: TCGAPLXNA1 DZIP1L
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDZIP1L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DZIP1L
dbVarDZIP1L
ClinVarDZIP1L
1000_GenomesDZIP1L 
Exome Variant ServerDZIP1L
ExAC (Exome Aggregation Consortium)DZIP1L (select the gene name)
Genetic variants : HAPMAP199221
Genomic Variants (DGV)DZIP1L [DGVbeta]
DECIPHER (Syndromes)3:137787825-137832322  ENSG00000158163
CONAN: Copy Number AnalysisDZIP1L 
Mutations
ICGC Data PortalDZIP1L 
TCGA Data PortalDZIP1L 
Broad Tumor PortalDZIP1L
OASIS PortalDZIP1L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDZIP1L  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDZIP1L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DZIP1L
DgiDB (Drug Gene Interaction Database)DZIP1L
DoCM (Curated mutations)DZIP1L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DZIP1L (select a term)
intoGenDZIP1L
Cancer3DDZIP1L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDZIP1L
Genetic Testing Registry DZIP1L
NextProtQ8IYY4 [Medical]
TSGene199221
GENETestsDZIP1L
Huge Navigator DZIP1L [HugePedia]
snp3D : Map Gene to Disease199221
BioCentury BCIQDZIP1L
ClinGenDZIP1L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD199221
Chemical/Pharm GKB GenePA134951988
Clinical trialDZIP1L
Miscellaneous
canSAR (ICR)DZIP1L (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDZIP1L
EVEXDZIP1L
GoPubMedDZIP1L
iHOPDZIP1L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:02:25 CET 2017

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