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E2F2 (E2F transcription factor 2)

Identity

Alias_symbol (synonym)E2F-2
Other alias
HGNC (Hugo) E2F2
LocusID (NCBI) 1870
Atlas_Id 40383
Location 1p36.12  [Link to chromosome band 1p36]
Location_base_pair Starts at 23506428 and ends at 23531220 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)E2F2   3114
Cards
Entrez_Gene (NCBI)E2F2  1870  E2F transcription factor 2
AliasesE2F-2
GeneCards (Weizmann)E2F2
Ensembl hg19 (Hinxton)ENSG00000007968 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000007968 [Gene_View]  chr1:23506428-23531220 [Contig_View]  E2F2 [Vega]
ICGC DataPortalENSG00000007968
TCGA cBioPortalE2F2
AceView (NCBI)E2F2
Genatlas (Paris)E2F2
WikiGenes1870
SOURCE (Princeton)E2F2
Genetics Home Reference (NIH)E2F2
Genomic and cartography
GoldenPath hg38 (UCSC)E2F2  -     chr1:23506428-23531220 -  1p36.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)E2F2  -     1p36.12   [Description]    (hg19-Feb_2009)
EnsemblE2F2 - 1p36.12 [CytoView hg19]  E2F2 - 1p36.12 [CytoView hg38]
Mapping of homologs : NCBIE2F2 [Mapview hg19]  E2F2 [Mapview hg38]
OMIM600426   
Gene and transcription
Genbank (Entrez)AF086395 AK092799 AK313939 BC007609 BC053676
RefSeq transcript (Entrez)NM_004091
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)E2F2
Cluster EST : UnigeneHs.194333 [ NCBI ]
CGAP (NCI)Hs.194333
Alternative Splicing GalleryENSG00000007968
Gene ExpressionE2F2 [ NCBI-GEO ]   E2F2 [ EBI - ARRAY_EXPRESS ]   E2F2 [ SEEK ]   E2F2 [ MEM ]
Gene Expression Viewer (FireBrowse)E2F2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)1870
GTEX Portal (Tissue expression)E2F2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14209   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14209  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14209
Splice isoforms : SwissVarQ14209
PhosPhoSitePlusQ14209
Domains : Interpro (EBI)E2F    E2F_CC-MB    E2F_WHTH_DNA-bd_dom    WHTH_DNA-bd_dom   
Domain families : Pfam (Sanger)E2F_CC-MB (PF16421)    E2F_TDP (PF02319)   
Domain families : Pfam (NCBI)pfam16421    pfam02319   
Domain families : Smart (EMBL)E2F_TDP (SM01372)  
Conserved Domain (NCBI)E2F2
DMDM Disease mutations1870
Blocks (Seattle)E2F2
PDB (SRS)1N4M   
PDB (PDBSum)1N4M   
PDB (IMB)1N4M   
PDB (RSDB)1N4M   
Structural Biology KnowledgeBase1N4M   
SCOP (Structural Classification of Proteins)1N4M   
CATH (Classification of proteins structures)1N4M   
SuperfamilyQ14209
Human Protein AtlasENSG00000007968
Peptide AtlasQ14209
HPRD02692
IPIIPI00290548   IPI00063570   
Protein Interaction databases
DIP (DOE-UCLA)Q14209
IntAct (EBI)Q14209
FunCoupENSG00000007968
BioGRIDE2F2
STRING (EMBL)E2F2
ZODIACE2F2
Ontologies - Pathways
QuickGOQ14209
Ontology : AmiGOcore promoter binding  DNA binding  transcription factor activity, sequence-specific DNA binding  protein binding  nucleoplasm  transcription factor complex  regulation of transcription, DNA-templated  transcription initiation from RNA polymerase II promoter  cell cycle  transcription factor binding  protein dimerization activity  regulation of cell cycle  intrinsic apoptotic signaling pathway by p53 class mediator  lens fiber cell apoptotic process  
Ontology : EGO-EBIcore promoter binding  DNA binding  transcription factor activity, sequence-specific DNA binding  protein binding  nucleoplasm  transcription factor complex  regulation of transcription, DNA-templated  transcription initiation from RNA polymerase II promoter  cell cycle  transcription factor binding  protein dimerization activity  regulation of cell cycle  intrinsic apoptotic signaling pathway by p53 class mediator  lens fiber cell apoptotic process  
Pathways : KEGG   
NDEx NetworkE2F2
Atlas of Cancer Signalling NetworkE2F2
Wikipedia pathwaysE2F2
Orthology - Evolution
OrthoDB1870
GeneTree (enSembl)ENSG00000007968
Phylogenetic Trees/Animal Genes : TreeFamE2F2
HOVERGENQ14209
HOGENOMQ14209
Homologs : HomoloGeneE2F2
Homology/Alignments : Family Browser (UCSC)E2F2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerE2F2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)E2F2
dbVarE2F2
ClinVarE2F2
1000_GenomesE2F2 
Exome Variant ServerE2F2
ExAC (Exome Aggregation Consortium)E2F2 (select the gene name)
Genetic variants : HAPMAP1870
Genomic Variants (DGV)E2F2 [DGVbeta]
DECIPHERE2F2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisE2F2 
Mutations
ICGC Data PortalE2F2 
TCGA Data PortalE2F2 
Broad Tumor PortalE2F2
OASIS PortalE2F2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICE2F2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDE2F2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch E2F2
DgiDB (Drug Gene Interaction Database)E2F2
DoCM (Curated mutations)E2F2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)E2F2 (select a term)
intoGenE2F2
Cancer3DE2F2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM600426   
Orphanet
MedgenE2F2
Genetic Testing Registry E2F2
NextProtQ14209 [Medical]
TSGene1870
GENETestsE2F2
Target ValidationE2F2
Huge Navigator E2F2 [HugePedia]
snp3D : Map Gene to Disease1870
BioCentury BCIQE2F2
ClinGenE2F2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD1870
Chemical/Pharm GKB GenePA27572
Clinical trialE2F2
Miscellaneous
canSAR (ICR)E2F2 (select the gene name)
Probes
Litterature
PubMed82 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineE2F2
EVEXE2F2
GoPubMedE2F2
iHOPE2F2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:00:05 CEST 2017

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