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EBLN2 (endogenous Bornavirus-like nucleoprotein 2)

Identity

Other aliasEBLN-2
HGNC (Hugo) EBLN2
LocusID (NCBI) 55096
Atlas_Id 62707
Location 3p13  [Link to chromosome band 3p13]
Location_base_pair Starts at 73061659 and ends at 73063320 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EBLN2   25493
Cards
Entrez_Gene (NCBI)EBLN2  55096  endogenous Bornavirus-like nucleoprotein 2
AliasesEBLN-2
GeneCards (Weizmann)EBLN2
Ensembl hg19 (Hinxton)ENSG00000255423 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255423 [Gene_View]  chr3:73061659-73063320 [Contig_View]  EBLN2 [Vega]
ICGC DataPortalENSG00000255423
TCGA cBioPortalEBLN2
AceView (NCBI)EBLN2
Genatlas (Paris)EBLN2
WikiGenes55096
SOURCE (Princeton)EBLN2
Genetics Home Reference (NIH)EBLN2
Genomic and cartography
GoldenPath hg38 (UCSC)EBLN2  -     chr3:73061659-73063320 +  3p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EBLN2  -     3p13   [Description]    (hg19-Feb_2009)
EnsemblEBLN2 - 3p13 [CytoView hg19]  EBLN2 - 3p13 [CytoView hg38]
Mapping of homologs : NCBIEBLN2 [Mapview hg19]  EBLN2 [Mapview hg38]
OMIM613250   
Gene and transcription
Genbank (Entrez)AK001075 AY036895 BC051316 BC064501
RefSeq transcript (Entrez)NM_018029
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EBLN2
Cluster EST : UnigeneHs.658858 [ NCBI ]
CGAP (NCI)Hs.658858
Alternative Splicing GalleryENSG00000255423
Gene ExpressionEBLN2 [ NCBI-GEO ]   EBLN2 [ EBI - ARRAY_EXPRESS ]   EBLN2 [ SEEK ]   EBLN2 [ MEM ]
Gene Expression Viewer (FireBrowse)EBLN2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55096
GTEX Portal (Tissue expression)EBLN2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6P2I7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6P2I7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6P2I7
Splice isoforms : SwissVarQ6P2I7
PhosPhoSitePlusQ6P2I7
Domains : Interpro (EBI)P40_nucleoprot_BD-vir    P40_nucleoprot_sub1_BD-vir   
Domain families : Pfam (Sanger)BDV_P40 (PF06407)   
Domain families : Pfam (NCBI)pfam06407   
Conserved Domain (NCBI)EBLN2
DMDM Disease mutations55096
Blocks (Seattle)EBLN2
SuperfamilyQ6P2I7
Human Protein AtlasENSG00000255423
Peptide AtlasQ6P2I7
HPRD07654
IPIIPI00163601   
Protein Interaction databases
DIP (DOE-UCLA)Q6P2I7
IntAct (EBI)Q6P2I7
FunCoupENSG00000255423
BioGRIDEBLN2
STRING (EMBL)EBLN2
ZODIACEBLN2
Ontologies - Pathways
QuickGOQ6P2I7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkEBLN2
Atlas of Cancer Signalling NetworkEBLN2
Wikipedia pathwaysEBLN2
Orthology - Evolution
OrthoDB55096
GeneTree (enSembl)ENSG00000255423
Phylogenetic Trees/Animal Genes : TreeFamEBLN2
HOVERGENQ6P2I7
HOGENOMQ6P2I7
Homologs : HomoloGeneEBLN2
Homology/Alignments : Family Browser (UCSC)EBLN2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEBLN2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EBLN2
dbVarEBLN2
ClinVarEBLN2
1000_GenomesEBLN2 
Exome Variant ServerEBLN2
ExAC (Exome Aggregation Consortium)EBLN2 (select the gene name)
Genetic variants : HAPMAP55096
Genomic Variants (DGV)EBLN2 [DGVbeta]
DECIPHEREBLN2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisEBLN2 
Mutations
ICGC Data PortalEBLN2 
TCGA Data PortalEBLN2 
Broad Tumor PortalEBLN2
OASIS PortalEBLN2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICEBLN2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDEBLN2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch EBLN2
DgiDB (Drug Gene Interaction Database)EBLN2
DoCM (Curated mutations)EBLN2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EBLN2 (select a term)
intoGenEBLN2
Cancer3DEBLN2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613250   
Orphanet
MedgenEBLN2
Genetic Testing Registry EBLN2
NextProtQ6P2I7 [Medical]
TSGene55096
GENETestsEBLN2
Target ValidationEBLN2
Huge Navigator EBLN2 [HugePedia]
snp3D : Map Gene to Disease55096
BioCentury BCIQEBLN2
ClinGenEBLN2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55096
Chemical/Pharm GKB GenePA166048968
Clinical trialEBLN2
Miscellaneous
canSAR (ICR)EBLN2 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEBLN2
EVEXEBLN2
GoPubMedEBLN2
iHOPEBLN2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:06:48 CEST 2017

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