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EBPL (EBP like)

Identity

Alias (NCBI)EBRP
HGNC (Hugo) EBPL
HGNC Alias symbEBRP
HGNC Previous nameemopamil binding protein-like
LocusID (NCBI) 84650
Atlas_Id 62710
Location 13q14.2  [Link to chromosome band 13q14]
Location_base_pair Starts at 49660674 and ends at 49691486 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
EBPL (13q14.2) / COL1A2 (7q21.3)EBPL (13q14.2) / KPNA3 (13q14.2)EBPL (13q14.2) / LPAR6 (13q14.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)EBPL   18061
Cards
Entrez_Gene (NCBI)EBPL    EBP like
AliasesEBRP
GeneCards (Weizmann)EBPL
Ensembl hg19 (Hinxton)ENSG00000123179 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000123179 [Gene_View]  ENSG00000123179 [Sequence]  chr13:49660674-49691486 [Contig_View]  EBPL [Vega]
ICGC DataPortalENSG00000123179
TCGA cBioPortalEBPL
AceView (NCBI)EBPL
Genatlas (Paris)EBPL
SOURCE (Princeton)EBPL
Genetics Home Reference (NIH)EBPL
Genomic and cartography
GoldenPath hg38 (UCSC)EBPL  -     chr13:49660674-49691486 -  13q14.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EBPL  -     13q14.2   [Description]    (hg19-Feb_2009)
GoldenPathEBPL - 13q14.2 [CytoView hg19]  EBPL - 13q14.2 [CytoView hg38]
ImmunoBaseENSG00000123179
genome Data Viewer NCBIEBPL [Mapview hg19]  
OMIM617335   
Gene and transcription
Genbank (Entrez)AA677833 AF243433 BC018478 BC021021 BC073152
RefSeq transcript (Entrez)NM_001278636 NM_032565
Consensus coding sequences : CCDS (NCBI)EBPL
Alternative Splicing GalleryENSG00000123179
Gene ExpressionEBPL [ NCBI-GEO ]   EBPL [ EBI - ARRAY_EXPRESS ]   EBPL [ SEEK ]   EBPL [ MEM ]
Gene Expression Viewer (FireBrowse)EBPL [ Firebrowse - Broad ]
GenevisibleExpression of EBPL in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84650
GTEX Portal (Tissue expression)EBPL
Human Protein AtlasENSG00000123179-EBPL [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BY08   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BY08  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BY08
PhosPhoSitePlusQ9BY08
Domaine pattern : Prosite (Expaxy)EXPERA (PS51751)   
Domains : Interpro (EBI)EBP    EXPERA   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EBPL
SuperfamilyQ9BY08
AlphaFold pdb e-kbQ9BY08   
Human Protein Atlas [tissue]ENSG00000123179-EBPL [tissue]
HPRD13258
Protein Interaction databases
DIP (DOE-UCLA)Q9BY08
IntAct (EBI)Q9BY08
BioGRIDEBPL
STRING (EMBL)EBPL
ZODIACEBPL
Ontologies - Pathways
QuickGOQ9BY08
Ontology : AmiGOendoplasmic reticulum  endoplasmic reticulum  endoplasmic reticulum membrane  integral component of membrane  sterol metabolic process  cholestenol delta-isomerase activity  
Ontology : EGO-EBIendoplasmic reticulum  endoplasmic reticulum  endoplasmic reticulum membrane  integral component of membrane  sterol metabolic process  cholestenol delta-isomerase activity  
NDEx NetworkEBPL
Atlas of Cancer Signalling NetworkEBPL
Wikipedia pathwaysEBPL
Orthology - Evolution
OrthoDB84650
GeneTree (enSembl)ENSG00000123179
Phylogenetic Trees/Animal Genes : TreeFamEBPL
Homologs : HomoloGeneEBPL
Homology/Alignments : Family Browser (UCSC)EBPL
Gene fusions - Rearrangements
Fusion : QuiverEBPL
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEBPL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EBPL
dbVarEBPL
ClinVarEBPL
MonarchEBPL
1000_GenomesEBPL 
Exome Variant ServerEBPL
GNOMAD BrowserENSG00000123179
Varsome BrowserEBPL
Genomic Variants (DGV)EBPL [DGVbeta]
DECIPHEREBPL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisEBPL 
Mutations
ICGC Data PortalEBPL 
TCGA Data PortalEBPL 
Broad Tumor PortalEBPL
OASIS PortalEBPL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICEBPL  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DEBPL
Mutations and Diseases : HGMDEBPL
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutasearch EBPL
DgiDB (Drug Gene Interaction Database)EBPL
DoCM (Curated mutations)EBPL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EBPL (select a term)
Cancer3DEBPL(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617335   
Orphanet
DisGeNETEBPL
MedgenEBPL
Genetic Testing Registry EBPL
NextProtQ9BY08 [Medical]
GENETestsEBPL
Target ValidationEBPL
Huge Navigator EBPL [HugePedia]
ClinGenEBPL
Clinical trials, drugs, therapy
MyCancerGenomeEBPL
Protein Interactions : CTDEBPL
Pharm GKB GenePA134875632
PharosQ9BY08
Clinical trialEBPL
Miscellaneous
canSAR (ICR)EBPL
HarmonizomeEBPL
DataMed IndexEBPL
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXEBPL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Sep 15 22:54:51 CEST 2021

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