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EDA (ectodysplasin A)

Identity

Alias (NCBI)ECTD1
ED1
ED1-A1
ED1-A2
EDA-A1
EDA-A2
EDA1
EDA2
HED
HED1
ODT1
STHAGX1
TNLG7C
XHED
XLHED
HGNC (Hugo) EDA
HGNC Alias symbEDA1
XLHED
HED
XHED
ED1-A1
ED1-A2
EDA-A1
EDA-A2
HGNC Previous nameED1
 EDA2
 ODT1
HGNC Previous nameectodermal dysplasia 1, anhidrotic
 oligodontia 1
LocusID (NCBI) 1896
Atlas_Id 40402
Location Xq13.1  [Link to chromosome band Xq13]
Location_base_pair Starts at 69616113 and ends at 70039471 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DOCK8 (9p24.3) / EDA (Xq13.1)EDA (Xq13.1) / DOCK8 (9p24.3)EDA (Xq13.1) / MID1 (Xp22.2)
SSBP3 (1p32.3) / EDA (Xq13.1)SSBP3 1p32.3 / EDA Xq13.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)EDA   3157
Cards
Entrez_Gene (NCBI)EDA    ectodysplasin A
AliasesECTD1; ED1; ED1-A1; ED1-A2; 
EDA-A1; EDA-A2; EDA1; EDA2; HED; HED1; ODT1; STHAGX1; TNLG7C; XHED; XLHED
GeneCards (Weizmann)EDA
Ensembl hg19 (Hinxton)ENSG00000158813 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000158813 [Gene_View]  ENSG00000158813 [Sequence]  chrX:69616113-70039471 [Contig_View]  EDA [Vega]
ICGC DataPortalENSG00000158813
TCGA cBioPortalEDA
AceView (NCBI)EDA
Genatlas (Paris)EDA
SOURCE (Princeton)EDA
Genetics Home Reference (NIH)EDA
Genomic and cartography
GoldenPath hg38 (UCSC)EDA  -     chrX:69616113-70039471 +  Xq13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EDA  -     Xq13.1   [Description]    (hg19-Feb_2009)
GoldenPathEDA - Xq13.1 [CytoView hg19]  EDA - Xq13.1 [CytoView hg38]
ImmunoBaseENSG00000158813
Genome Data Viewer NCBIEDA [Mapview hg19]  
OMIM300451   305100   313500   
Gene and transcription
Genbank (Entrez)AF040628 AF060999 AF061189 AF061190 AF061191
RefSeq transcript (Entrez)NM_001005609 NM_001005610 NM_001005611 NM_001005612 NM_001005613 NM_001005614 NM_001399
Consensus coding sequences : CCDS (NCBI)EDA
Gene ExpressionEDA [ NCBI-GEO ]   EDA [ EBI - ARRAY_EXPRESS ]   EDA [ SEEK ]   EDA [ MEM ]
Gene Expression Viewer (FireBrowse)EDA [ Firebrowse - Broad ]
GenevisibleExpression of EDA in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)1896
GTEX Portal (Tissue expression)EDA
Human Protein AtlasENSG00000158813-EDA [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EDA
Human Protein Atlas [tissue]ENSG00000158813-EDA [tissue]
HPRD02347
Protein Interaction databases
BioGRIDEDA
STRING (EMBL)EDA
ZODIACEDA
Ontologies - Pathways
Litterature
PubMed122 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXEDA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:07:40 CEST 2021

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