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EEF2KMT (eukaryotic elongation factor 2 lysine methyltransferase)

Identity

Alias_namesFAM86A
family with sequence similarity 86, member A
Alias_symbol (synonym)SB153
MGC19636
Other aliasEFM3
eEF2-KMT
HGNC (Hugo) EEF2KMT
LocusID (NCBI) 196483
Atlas_Id 76916
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 5084300 and ends at 5097820 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EEF2KMT   32221
Cards
Entrez_Gene (NCBI)EEF2KMT  196483  eukaryotic elongation factor 2 lysine methyltransferase
AliasesEFM3; FAM86A; SB153; eEF2-KMT
GeneCards (Weizmann)EEF2KMT
Ensembl hg19 (Hinxton)ENSG00000118894 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000118894 [Gene_View]  chr16:5084300-5097820 [Contig_View]  EEF2KMT [Vega]
ICGC DataPortalENSG00000118894
TCGA cBioPortalEEF2KMT
AceView (NCBI)EEF2KMT
Genatlas (Paris)EEF2KMT
WikiGenes196483
SOURCE (Princeton)EEF2KMT
Genetics Home Reference (NIH)EEF2KMT
Genomic and cartography
GoldenPath hg38 (UCSC)EEF2KMT  -     chr16:5084300-5097820 -  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EEF2KMT  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblEEF2KMT - 16p13.3 [CytoView hg19]  EEF2KMT - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBIEEF2KMT [Mapview hg19]  EEF2KMT [Mapview hg38]
OMIM615263   
Gene and transcription
Genbank (Entrez)AA454579 AI669435 AL522535 AY037162 BC010084
RefSeq transcript (Entrez)NM_001289029 NM_201400 NM_201598
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EEF2KMT
Cluster EST : UnigeneHs.592086 [ NCBI ]
CGAP (NCI)Hs.592086
Alternative Splicing GalleryENSG00000118894
Gene ExpressionEEF2KMT [ NCBI-GEO ]   EEF2KMT [ EBI - ARRAY_EXPRESS ]   EEF2KMT [ SEEK ]   EEF2KMT [ MEM ]
Gene Expression Viewer (FireBrowse)EEF2KMT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)196483
GTEX Portal (Tissue expression)EEF2KMT
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96G04   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96G04  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96G04
Splice isoforms : SwissVarQ96G04
PhosPhoSitePlusQ96G04
Domains : Interpro (EBI)FAM86    Methyltransf_16    SAM-dependent_MTases   
Domain families : Pfam (Sanger)FAM86 (PF14904)    Methyltransf_16 (PF10294)   
Domain families : Pfam (NCBI)pfam14904    pfam10294   
Conserved Domain (NCBI)EEF2KMT
DMDM Disease mutations196483
Blocks (Seattle)EEF2KMT
SuperfamilyQ96G04
Human Protein AtlasENSG00000118894
Peptide AtlasQ96G04
HPRD18018
IPIIPI00402375   IPI00290341   
Protein Interaction databases
DIP (DOE-UCLA)Q96G04
IntAct (EBI)Q96G04
FunCoupENSG00000118894
BioGRIDEEF2KMT
STRING (EMBL)EEF2KMT
ZODIACEEF2KMT
Ontologies - Pathways
QuickGOQ96G04
Ontology : AmiGOprotein binding  cytosol  protein methylation  protein-lysine N-methyltransferase activity  protein-lysine N-methyltransferase activity  peptidyl-lysine trimethylation  
Ontology : EGO-EBIprotein binding  cytosol  protein methylation  protein-lysine N-methyltransferase activity  protein-lysine N-methyltransferase activity  peptidyl-lysine trimethylation  
NDEx NetworkEEF2KMT
Atlas of Cancer Signalling NetworkEEF2KMT
Wikipedia pathwaysEEF2KMT
Orthology - Evolution
OrthoDB196483
GeneTree (enSembl)ENSG00000118894
Phylogenetic Trees/Animal Genes : TreeFamEEF2KMT
HOVERGENQ96G04
HOGENOMQ96G04
Homologs : HomoloGeneEEF2KMT
Homology/Alignments : Family Browser (UCSC)EEF2KMT
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEEF2KMT [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EEF2KMT
dbVarEEF2KMT
ClinVarEEF2KMT
1000_GenomesEEF2KMT 
Exome Variant ServerEEF2KMT
ExAC (Exome Aggregation Consortium)EEF2KMT (select the gene name)
Genetic variants : HAPMAP196483
Genomic Variants (DGV)EEF2KMT [DGVbeta]
DECIPHEREEF2KMT [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisEEF2KMT 
Mutations
ICGC Data PortalEEF2KMT 
TCGA Data PortalEEF2KMT 
Broad Tumor PortalEEF2KMT
OASIS PortalEEF2KMT [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDEEF2KMT
BioMutasearch EEF2KMT
DgiDB (Drug Gene Interaction Database)EEF2KMT
DoCM (Curated mutations)EEF2KMT (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EEF2KMT (select a term)
intoGenEEF2KMT
Cancer3DEEF2KMT(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615263   
Orphanet
MedgenEEF2KMT
Genetic Testing Registry EEF2KMT
NextProtQ96G04 [Medical]
TSGene196483
GENETestsEEF2KMT
Target ValidationEEF2KMT
Huge Navigator EEF2KMT [HugePedia]
snp3D : Map Gene to Disease196483
BioCentury BCIQEEF2KMT
ClinGenEEF2KMT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD196483
Chemical/Pharm GKB GenePA142671858
Clinical trialEEF2KMT
Miscellaneous
canSAR (ICR)EEF2KMT (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEEF2KMT
EVEXEEF2KMT
GoPubMedEEF2KMT
iHOPEEF2KMT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:06:52 CEST 2017

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