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EFCAB14-AS1 (EFCAB14 antisense RNA 1)

Identity

Alias_namesKIAA0494-AS1
KIAA0494 antisense RNA 1 (non-protein coding)
KIAA0494 antisense RNA 1
Other alias
HGNC (Hugo) EFCAB14-AS1
LocusID (NCBI) 100130197
Atlas_Id 62740
Location 1p33  [Link to chromosome band 1p33]
Location_base_pair Starts at 47139708 and ends at 47157769 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EFCAB14-AS1   44108
Cards
Entrez_Gene (NCBI)EFCAB14-AS1  100130197  EFCAB14 antisense RNA 1
AliasesKIAA0494-AS1
GeneCards (Weizmann)EFCAB14-AS1
Ensembl hg19 (Hinxton)ENSG00000228237 [Gene_View]  chr1:47139708-47157769 [Contig_View]  EFCAB14-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000228237 [Gene_View]  chr1:47139708-47157769 [Contig_View]  EFCAB14-AS1 [Vega]
ICGC DataPortalENSG00000228237
TCGA cBioPortalEFCAB14-AS1
AceView (NCBI)EFCAB14-AS1
Genatlas (Paris)EFCAB14-AS1
WikiGenes100130197
SOURCE (Princeton)EFCAB14-AS1
Genetics Home Reference (NIH)EFCAB14-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)EFCAB14-AS1  -     chr1:47139708-47157769 +  1p33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)EFCAB14-AS1  -     1p33   [Description]    (hg38-Dec_2013)
EnsemblEFCAB14-AS1 - 1p33 [CytoView hg19]  EFCAB14-AS1 - 1p33 [CytoView hg38]
Mapping of homologs : NCBIEFCAB14-AS1 [Mapview hg19]  EFCAB14-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA993124 BE504902 BX113937 HG491991 HG491992
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)EFCAB14-AS1
Cluster EST : UnigeneHs.568643 [ NCBI ]
CGAP (NCI)Hs.568643
Alternative Splicing GalleryENSG00000228237
Gene ExpressionEFCAB14-AS1 [ NCBI-GEO ]   EFCAB14-AS1 [ EBI - ARRAY_EXPRESS ]   EFCAB14-AS1 [ SEEK ]   EFCAB14-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)EFCAB14-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100130197
GTEX Portal (Tissue expression)EFCAB14-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EFCAB14-AS1
DMDM Disease mutations100130197
Blocks (Seattle)EFCAB14-AS1
Human Protein AtlasENSG00000228237
Protein Interaction databases
FunCoupENSG00000228237
BioGRIDEFCAB14-AS1
STRING (EMBL)EFCAB14-AS1
ZODIACEFCAB14-AS1
Ontologies - Pathways
Huge Navigator EFCAB14-AS1 [HugePedia]
snp3D : Map Gene to Disease100130197
BioCentury BCIQEFCAB14-AS1
ClinGenEFCAB14-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100130197
Clinical trialEFCAB14-AS1
Miscellaneous
canSAR (ICR)EFCAB14-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEFCAB14-AS1
EVEXEFCAB14-AS1
GoPubMedEFCAB14-AS1
iHOPEFCAB14-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:02:34 CET 2017

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