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EGFL7 (EGF like domain multiple 7)

Identity

Alias_namesEGF-like-domain
Alias_symbol (synonym)ZNEU1
Other aliasNEU1
VE-STATIN
HGNC (Hugo) EGFL7
LocusID (NCBI) 51162
Atlas_Id 50572
Location 9q34.3  [Link to chromosome band 9q34]
Location_base_pair Starts at 139557379 and ends at 139567130 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EGFL7   20594
Cards
Entrez_Gene (NCBI)EGFL7  51162  EGF like domain multiple 7
AliasesNEU1; VE-STATIN; ZNEU1
GeneCards (Weizmann)EGFL7
Ensembl hg19 (Hinxton)ENSG00000172889 [Gene_View]  chr9:139557379-139567130 [Contig_View]  EGFL7 [Vega]
Ensembl hg38 (Hinxton)ENSG00000172889 [Gene_View]  chr9:139557379-139567130 [Contig_View]  EGFL7 [Vega]
ICGC DataPortalENSG00000172889
TCGA cBioPortalEGFL7
AceView (NCBI)EGFL7
Genatlas (Paris)EGFL7
WikiGenes51162
SOURCE (Princeton)EGFL7
Genetics Home Reference (NIH)EGFL7
Genomic and cartography
GoldenPath hg19 (UCSC)EGFL7  -     chr9:139557379-139567130 +  9q34.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)EGFL7  -     9q34.3   [Description]    (hg38-Dec_2013)
EnsemblEGFL7 - 9q34.3 [CytoView hg19]  EGFL7 - 9q34.3 [CytoView hg38]
Mapping of homologs : NCBIEGFL7 [Mapview hg19]  EGFL7 [Mapview hg38]
OMIM608582   
Gene and transcription
Genbank (Entrez)AB125649 AF186111 AK091964 AL512735 AY358902
RefSeq transcript (Entrez)NM_016215 NM_201446
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008470 NW_004929369
Consensus coding sequences : CCDS (NCBI)EGFL7
Cluster EST : UnigeneHs.91481 [ NCBI ]
CGAP (NCI)Hs.91481
Alternative Splicing GalleryENSG00000172889
Gene ExpressionEGFL7 [ NCBI-GEO ]   EGFL7 [ EBI - ARRAY_EXPRESS ]   EGFL7 [ SEEK ]   EGFL7 [ MEM ]
Gene Expression Viewer (FireBrowse)EGFL7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51162
GTEX Portal (Tissue expression)EGFL7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UHF1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UHF1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UHF1
Splice isoforms : SwissVarQ9UHF1
PhosPhoSitePlusQ9UHF1
Domaine pattern : Prosite (Expaxy)ASX_HYDROXYL (PS00010)    EGF_1 (PS00022)    EGF_2 (PS01186)    EGF_3 (PS50026)    EGF_CA (PS01187)    EMI (PS51041)   
Domains : Interpro (EBI)EGF-like_Ca-bd_dom    EGF-like_CS    EGF-like_dom    EGF_Ca-bd_CS    EGF_extracell    EMI_domain    Growth_fac_rcpt_   
Domain families : Pfam (Sanger)EGF_2 (PF07974)    EGF_CA (PF07645)    EMI (PF07546)   
Domain families : Pfam (NCBI)pfam07974    pfam07645    pfam07546   
Domain families : Smart (EMBL)EGF (SM00181)  EGF_CA (SM00179)  
Conserved Domain (NCBI)EGFL7
DMDM Disease mutations51162
Blocks (Seattle)EGFL7
SuperfamilyQ9UHF1
Human Protein AtlasENSG00000172889
Peptide AtlasQ9UHF1
HPRD16351
IPIIPI00383960   
Protein Interaction databases
DIP (DOE-UCLA)Q9UHF1
IntAct (EBI)Q9UHF1
FunCoupENSG00000172889
BioGRIDEGFL7
STRING (EMBL)EGFL7
ZODIACEGFL7
Ontologies - Pathways
QuickGOQ9UHF1
Ontology : AmiGOangiogenesis  blood vessel development  vasculogenesis  positive regulation of endothelial cell proliferation  calcium ion binding  extracellular region  extracellular space  cell adhesion  extracellular matrix  negative regulation of Notch signaling pathway  
Ontology : EGO-EBIangiogenesis  blood vessel development  vasculogenesis  positive regulation of endothelial cell proliferation  calcium ion binding  extracellular region  extracellular space  cell adhesion  extracellular matrix  negative regulation of Notch signaling pathway  
NDEx NetworkEGFL7
Atlas of Cancer Signalling NetworkEGFL7
Wikipedia pathwaysEGFL7
Orthology - Evolution
OrthoDB51162
GeneTree (enSembl)ENSG00000172889
Phylogenetic Trees/Animal Genes : TreeFamEGFL7
HOVERGENQ9UHF1
HOGENOMQ9UHF1
Homologs : HomoloGeneEGFL7
Homology/Alignments : Family Browser (UCSC)EGFL7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEGFL7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EGFL7
dbVarEGFL7
ClinVarEGFL7
1000_GenomesEGFL7 
Exome Variant ServerEGFL7
ExAC (Exome Aggregation Consortium)EGFL7 (select the gene name)
Genetic variants : HAPMAP51162
Genomic Variants (DGV)EGFL7 [DGVbeta]
DECIPHER (Syndromes)9:139557379-139567130  ENSG00000172889
CONAN: Copy Number AnalysisEGFL7 
Mutations
ICGC Data PortalEGFL7 
TCGA Data PortalEGFL7 
Broad Tumor PortalEGFL7
OASIS PortalEGFL7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICEGFL7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDEGFL7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch EGFL7
DgiDB (Drug Gene Interaction Database)EGFL7
DoCM (Curated mutations)EGFL7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EGFL7 (select a term)
intoGenEGFL7
Cancer3DEGFL7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608582   
Orphanet
MedgenEGFL7
Genetic Testing Registry EGFL7
NextProtQ9UHF1 [Medical]
TSGene51162
GENETestsEGFL7
Huge Navigator EGFL7 [HugePedia]
snp3D : Map Gene to Disease51162
BioCentury BCIQEGFL7
ClinGenEGFL7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51162
Chemical/Pharm GKB GenePA134928613
Clinical trialEGFL7
Miscellaneous
canSAR (ICR)EGFL7 (select the gene name)
Probes
Litterature
PubMed49 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEGFL7
EVEXEGFL7
GoPubMedEGFL7
iHOPEGFL7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:04:21 CET 2017

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