Atlas of Genetics and Cytogenetics in Oncology and Haematology


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EGFLAM-AS2 (EGFLAM antisense RNA 2)

Identity

Alias_namesEGFLAM antisense RNA 2 (non-protein coding)
Other alias-
HGNC (Hugo) EGFLAM-AS2
LocusID (NCBI) 100506475
Atlas_Id 62757
Location 5p13.1  [Link to chromosome band 5p13]
Location_base_pair Starts at 38400553 and ends at 38403573 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EGFLAM-AS2   41168
Cards
Entrez_Gene (NCBI)EGFLAM-AS2  100506475  EGFLAM antisense RNA 2
Aliases
GeneCards (Weizmann)EGFLAM-AS2
Ensembl hg19 (Hinxton)ENSG00000248572 [Gene_View]  chr5:38400553-38403573 [Contig_View]  EGFLAM-AS2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000248572 [Gene_View]  chr5:38400553-38403573 [Contig_View]  EGFLAM-AS2 [Vega]
ICGC DataPortalENSG00000248572
TCGA cBioPortalEGFLAM-AS2
AceView (NCBI)EGFLAM-AS2
Genatlas (Paris)EGFLAM-AS2
WikiGenes100506475
SOURCE (Princeton)EGFLAM-AS2
Genetics Home Reference (NIH)EGFLAM-AS2
Genomic and cartography
GoldenPath hg19 (UCSC)EGFLAM-AS2  -     chr5:38400553-38403573 -  5p13.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)EGFLAM-AS2  -     5p13.1   [Description]    (hg38-Dec_2013)
EnsemblEGFLAM-AS2 - 5p13.1 [CytoView hg19]  EGFLAM-AS2 - 5p13.1 [CytoView hg38]
Mapping of homologs : NCBIEGFLAM-AS2 [Mapview hg19]  EGFLAM-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI359548 AK093278 BX093664 DB029288 HG497891
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_006576 NW_004929321
Consensus coding sequences : CCDS (NCBI)EGFLAM-AS2
Cluster EST : UnigeneHs.733718 [ NCBI ]
CGAP (NCI)Hs.733718
Alternative Splicing GalleryENSG00000248572
Gene ExpressionEGFLAM-AS2 [ NCBI-GEO ]   EGFLAM-AS2 [ EBI - ARRAY_EXPRESS ]   EGFLAM-AS2 [ SEEK ]   EGFLAM-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)EGFLAM-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506475
GTEX Portal (Tissue expression)EGFLAM-AS2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EGFLAM-AS2
DMDM Disease mutations100506475
Blocks (Seattle)EGFLAM-AS2
Human Protein AtlasENSG00000248572
Protein Interaction databases
FunCoupENSG00000248572
BioGRIDEGFLAM-AS2
STRING (EMBL)EGFLAM-AS2
ZODIACEGFLAM-AS2
Ontologies - Pathways
Huge Navigator EGFLAM-AS2 [HugePedia]
snp3D : Map Gene to Disease100506475
BioCentury BCIQEGFLAM-AS2
ClinGenEGFLAM-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506475
Clinical trialEGFLAM-AS2
Miscellaneous
canSAR (ICR)EGFLAM-AS2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEGFLAM-AS2
EVEXEGFLAM-AS2
GoPubMedEGFLAM-AS2
iHOPEGFLAM-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:02:37 CET 2017

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