Atlas of Genetics and Cytogenetics in Oncology and Haematology

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EI24 (EI24, autophagy associated transmembrane protein)

Identity

Alias_namesetoposide induced 2.4 mRNA
etoposide induced 2.4
Alias_symbol (synonym)PIG8
TP53I8
EPG4
Other alias
HGNC (Hugo) EI24
LocusID (NCBI) 9538
Atlas_Id 40422
Location 11q24.2  [Link to chromosome band 11q24]
Location_base_pair Starts at 125569387 and ends at 125584689 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
APLP2 (11q24.3) / EI24 (11q24.2)CHD4 (12p13.31) / EI24 (11q24.2)EI24 (11q24.2) / RUVBL1 (3q21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)EI24   13276
Cards
Entrez_Gene (NCBI)EI24  9538  EI24, autophagy associated transmembrane protein
AliasesEPG4; PIG8; TP53I8
GeneCards (Weizmann)EI24
Ensembl hg19 (Hinxton)ENSG00000149547 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000149547 [Gene_View]  ENSG00000149547 [Sequence]  chr11:125569387-125584689 [Contig_View]  EI24 [Vega]
ICGC DataPortalENSG00000149547
TCGA cBioPortalEI24
AceView (NCBI)EI24
Genatlas (Paris)EI24
WikiGenes9538
SOURCE (Princeton)EI24
Genetics Home Reference (NIH)EI24
Genomic and cartography
GoldenPath hg38 (UCSC)EI24  -     chr11:125569387-125584689 +  11q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EI24  -     11q24.2   [Description]    (hg19-Feb_2009)
GoldenPathEI24 - 11q24.2 [CytoView hg19]  EI24 - 11q24.2 [CytoView hg38]
ImmunoBaseENSG00000149547
Mapping of homologs : NCBIEI24 [Mapview hg19]  EI24 [Mapview hg38]
OMIM605170   
Gene and transcription
Genbank (Entrez)AA313725 AB209820 AF010313 AF131850 AK223029
RefSeq transcript (Entrez)NM_001007277 NM_001290135 NM_001330419 NM_004879
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EI24
Cluster EST : UnigeneHs.643514 [ NCBI ]
CGAP (NCI)Hs.643514
Alternative Splicing GalleryENSG00000149547
Gene ExpressionEI24 [ NCBI-GEO ]   EI24 [ EBI - ARRAY_EXPRESS ]   EI24 [ SEEK ]   EI24 [ MEM ]
Gene Expression Viewer (FireBrowse)EI24 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9538
GTEX Portal (Tissue expression)EI24
Human Protein AtlasENSG00000149547-EI24 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO14681   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO14681  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO14681
Splice isoforms : SwissVarO14681
PhosPhoSitePlusO14681
Domains : Interpro (EBI)EI24   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EI24
DMDM Disease mutations9538
Blocks (Seattle)EI24
SuperfamilyO14681
Human Protein Atlas [tissue]ENSG00000149547-EI24 [tissue]
Peptide AtlasO14681
HPRD05526
IPIIPI00478368   IPI00872497   IPI00976240   IPI00983056   IPI00985443   IPI00982241   IPI00976810   
Protein Interaction databases
DIP (DOE-UCLA)O14681
IntAct (EBI)O14681
FunCoupENSG00000149547
BioGRIDEI24
STRING (EMBL)EI24
ZODIACEI24
Ontologies - Pathways
QuickGOO14681
Ontology : AmiGOendoplasmic reticulum  endoplasmic reticulum  endoplasmic reticulum membrane  Golgi apparatus  cytosol  apoptotic process  membrane  integral component of membrane  macroautophagy  negative regulation of cell growth  nuclear membrane  
Ontology : EGO-EBIendoplasmic reticulum  endoplasmic reticulum  endoplasmic reticulum membrane  Golgi apparatus  cytosol  apoptotic process  membrane  integral component of membrane  macroautophagy  negative regulation of cell growth  nuclear membrane  
Pathways : KEGGp53 signaling pathway   
NDEx NetworkEI24
Atlas of Cancer Signalling NetworkEI24
Wikipedia pathwaysEI24
Orthology - Evolution
OrthoDB9538
GeneTree (enSembl)ENSG00000149547
Phylogenetic Trees/Animal Genes : TreeFamEI24
HOGENOMO14681
Homologs : HomoloGeneEI24
Homology/Alignments : Family Browser (UCSC)EI24
Gene fusions - Rearrangements
Fusion : QuiverEI24
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEI24 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EI24
dbVarEI24
ClinVarEI24
1000_GenomesEI24 
Exome Variant ServerEI24
ExAC (Exome Aggregation Consortium)ENSG00000149547
GNOMAD BrowserENSG00000149547
Varsome BrowserEI24
Genetic variants : HAPMAP9538
Genomic Variants (DGV)EI24 [DGVbeta]
DECIPHEREI24 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisEI24 
Mutations
ICGC Data PortalEI24 
TCGA Data PortalEI24 
Broad Tumor PortalEI24
OASIS PortalEI24 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDEI24
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch EI24
DgiDB (Drug Gene Interaction Database)EI24
DoCM (Curated mutations)EI24 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EI24 (select a term)
intoGenEI24
Cancer3DEI24(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605170   
Orphanet
DisGeNETEI24
MedgenEI24
Genetic Testing Registry EI24
NextProtO14681 [Medical]
TSGene9538
GENETestsEI24
Target ValidationEI24
Huge Navigator EI24 [HugePedia]
snp3D : Map Gene to Disease9538
BioCentury BCIQEI24
ClinGenEI24
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9538
Chemical/Pharm GKB GenePA134937367
Clinical trialEI24
Miscellaneous
canSAR (ICR)EI24 (select the gene name)
DataMed IndexEI24
Probes
Litterature
PubMed27 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEI24
EVEXEI24
GoPubMedEI24
iHOPEI24
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 8 11:18:43 CEST 2019
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