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EID2B (EP300 interacting inhibitor of differentiation 2B)

Identity

Alias_symbol (synonym)EID-3
FLJ38944
Other aliasEID-2B
HGNC (Hugo) EID2B
LocusID (NCBI) 126272
Atlas_Id 62766
Location 19q13.2  [Link to chromosome band 19q13]
Location_base_pair Starts at 39531533 and ends at 39532867 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EID2B   26796
Cards
Entrez_Gene (NCBI)EID2B  126272  EP300 interacting inhibitor of differentiation 2B
AliasesEID-2B; EID-3
GeneCards (Weizmann)EID2B
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:39531533-39532867 [Contig_View]  EID2B [Vega]
TCGA cBioPortalEID2B
AceView (NCBI)EID2B
Genatlas (Paris)EID2B
WikiGenes126272
SOURCE (Princeton)EID2B
Genetics Home Reference (NIH)EID2B
Genomic and cartography
GoldenPath hg38 (UCSC)EID2B  -     chr19:39531533-39532867 -  19q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EID2B  -     19q13.2   [Description]    (hg19-Feb_2009)
EnsemblEID2B - 19q13.2 [CytoView hg19]  EID2B - 19q13.2 [CytoView hg38]
Mapping of homologs : NCBIEID2B [Mapview hg19]  EID2B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096263 BC009725 BC040157 BC051333 BQ182601
RefSeq transcript (Entrez)NM_152361
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EID2B
Cluster EST : UnigeneHs.135181 [ NCBI ]
CGAP (NCI)Hs.135181
Gene ExpressionEID2B [ NCBI-GEO ]   EID2B [ EBI - ARRAY_EXPRESS ]   EID2B [ SEEK ]   EID2B [ MEM ]
Gene Expression Viewer (FireBrowse)EID2B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)126272
GTEX Portal (Tissue expression)EID2B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96D98   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96D98  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96D98
Splice isoforms : SwissVarQ96D98
PhosPhoSitePlusQ96D98
Domains : Interpro (EBI)EID    EID-3   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EID2B
DMDM Disease mutations126272
Blocks (Seattle)EID2B
SuperfamilyQ96D98
Peptide AtlasQ96D98
HPRD08795
IPIIPI00060730   
Protein Interaction databases
DIP (DOE-UCLA)Q96D98
IntAct (EBI)Q96D98
BioGRIDEID2B
STRING (EMBL)EID2B
ZODIACEID2B
Ontologies - Pathways
QuickGOQ96D98
Ontology : AmiGOnucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  muscle organ development  cell differentiation  
Ontology : EGO-EBInucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  muscle organ development  cell differentiation  
NDEx NetworkEID2B
Atlas of Cancer Signalling NetworkEID2B
Wikipedia pathwaysEID2B
Orthology - Evolution
OrthoDB126272
Phylogenetic Trees/Animal Genes : TreeFamEID2B
HOVERGENQ96D98
HOGENOMQ96D98
Homologs : HomoloGeneEID2B
Homology/Alignments : Family Browser (UCSC)EID2B
Gene fusions - Rearrangements
Tumor Fusion PortalEID2B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEID2B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EID2B
dbVarEID2B
ClinVarEID2B
1000_GenomesEID2B 
Exome Variant ServerEID2B
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP126272
Genomic Variants (DGV)EID2B [DGVbeta]
DECIPHEREID2B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisEID2B 
Mutations
ICGC Data PortalEID2B 
TCGA Data PortalEID2B 
Broad Tumor PortalEID2B
OASIS PortalEID2B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICEID2B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDEID2B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch EID2B
DgiDB (Drug Gene Interaction Database)EID2B
DoCM (Curated mutations)EID2B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EID2B (select a term)
intoGenEID2B
Cancer3DEID2B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETEID2B
MedgenEID2B
Genetic Testing Registry EID2B
NextProtQ96D98 [Medical]
TSGene126272
GENETestsEID2B
Target ValidationEID2B
Huge Navigator EID2B [HugePedia]
snp3D : Map Gene to Disease126272
BioCentury BCIQEID2B
ClinGenEID2B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD126272
Chemical/Pharm GKB GenePA162384551
Clinical trialEID2B
Miscellaneous
canSAR (ICR)EID2B (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEID2B
EVEXEID2B
GoPubMedEID2B
iHOPEID2B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:38:30 CET 2017

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