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EIF1AD (eukaryotic translation initiation factor 1A domain containing)

Identity

Alias_symbol (synonym)MGC11102
haponin
Other alias
HGNC (Hugo) EIF1AD
LocusID (NCBI) 84285
Atlas_Id 62767
Location 11q13.1  [Link to chromosome band 11q13]
Location_base_pair Starts at 65996545 and ends at 66002166 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
EIF1AD (11q13.1) / EIF1AD (11q13.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EIF1AD   28147
Cards
Entrez_Gene (NCBI)EIF1AD  84285  eukaryotic translation initiation factor 1A domain containing
Aliaseshaponin
GeneCards (Weizmann)EIF1AD
Ensembl hg19 (Hinxton)ENSG00000175376 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000175376 [Gene_View]  chr11:65996545-66002166 [Contig_View]  EIF1AD [Vega]
ICGC DataPortalENSG00000175376
TCGA cBioPortalEIF1AD
AceView (NCBI)EIF1AD
Genatlas (Paris)EIF1AD
WikiGenes84285
SOURCE (Princeton)EIF1AD
Genetics Home Reference (NIH)EIF1AD
Genomic and cartography
GoldenPath hg38 (UCSC)EIF1AD  -     chr11:65996545-66002166 -  11q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EIF1AD  -     11q13.1   [Description]    (hg19-Feb_2009)
EnsemblEIF1AD - 11q13.1 [CytoView hg19]  EIF1AD - 11q13.1 [CytoView hg38]
Mapping of homologs : NCBIEIF1AD [Mapview hg19]  EIF1AD [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI831454 AK094129 AK311891 AW872373 BC005131
RefSeq transcript (Entrez)NM_001242481 NM_001242482 NM_001242483 NM_001242484 NM_001242485 NM_001242486 NM_032325
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EIF1AD
Cluster EST : UnigeneHs.425178 [ NCBI ]
CGAP (NCI)Hs.425178
Alternative Splicing GalleryENSG00000175376
Gene ExpressionEIF1AD [ NCBI-GEO ]   EIF1AD [ EBI - ARRAY_EXPRESS ]   EIF1AD [ SEEK ]   EIF1AD [ MEM ]
Gene Expression Viewer (FireBrowse)EIF1AD [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84285
GTEX Portal (Tissue expression)EIF1AD
Human Protein AtlasENSG00000175376-EIF1AD [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N9N8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N9N8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N9N8
Splice isoforms : SwissVarQ8N9N8
PhosPhoSitePlusQ8N9N8
Domaine pattern : Prosite (Expaxy)S1_IF1_TYPE (PS50832)   
Domains : Interpro (EBI)NA-bd_OB-fold    RNA-binding_domain_S1_IF1    TIF_eIF-1A   
Domain families : Pfam (Sanger)eIF-1a (PF01176)   
Domain families : Pfam (NCBI)pfam01176   
Domain families : Smart (EMBL)eIF1a (SM00652)  
Conserved Domain (NCBI)EIF1AD
DMDM Disease mutations84285
Blocks (Seattle)EIF1AD
PDB (SRS)2DGY   
PDB (PDBSum)2DGY   
PDB (IMB)2DGY   
PDB (RSDB)2DGY   
Structural Biology KnowledgeBase2DGY   
SCOP (Structural Classification of Proteins)2DGY   
CATH (Classification of proteins structures)2DGY   
SuperfamilyQ8N9N8
Human Protein Atlas [tissue]ENSG00000175376-EIF1AD [tissue]
Peptide AtlasQ8N9N8
HPRD14411
IPIIPI00298618   IPI00980002   IPI00980832   IPI00981348   IPI00978664   IPI00984067   IPI00976744   
Protein Interaction databases
DIP (DOE-UCLA)Q8N9N8
IntAct (EBI)Q8N9N8
FunCoupENSG00000175376
BioGRIDEIF1AD
STRING (EMBL)EIF1AD
ZODIACEIF1AD
Ontologies - Pathways
QuickGOQ8N9N8
Ontology : AmiGOtranslation initiation factor activity  protein binding  nucleus  translational initiation  
Ontology : EGO-EBItranslation initiation factor activity  protein binding  nucleus  translational initiation  
NDEx NetworkEIF1AD
Atlas of Cancer Signalling NetworkEIF1AD
Wikipedia pathwaysEIF1AD
Orthology - Evolution
OrthoDB84285
GeneTree (enSembl)ENSG00000175376
Phylogenetic Trees/Animal Genes : TreeFamEIF1AD
HOVERGENQ8N9N8
HOGENOMQ8N9N8
Homologs : HomoloGeneEIF1AD
Homology/Alignments : Family Browser (UCSC)EIF1AD
Gene fusions - Rearrangements
Tumor Fusion PortalEIF1AD
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEIF1AD [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EIF1AD
dbVarEIF1AD
ClinVarEIF1AD
1000_GenomesEIF1AD 
Exome Variant ServerEIF1AD
ExAC (Exome Aggregation Consortium)ENSG00000175376
GNOMAD BrowserENSG00000175376
Genetic variants : HAPMAP84285
Genomic Variants (DGV)EIF1AD [DGVbeta]
DECIPHEREIF1AD [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisEIF1AD 
Mutations
ICGC Data PortalEIF1AD 
TCGA Data PortalEIF1AD 
Broad Tumor PortalEIF1AD
OASIS PortalEIF1AD [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICEIF1AD  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDEIF1AD
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch EIF1AD
DgiDB (Drug Gene Interaction Database)EIF1AD
DoCM (Curated mutations)EIF1AD (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EIF1AD (select a term)
intoGenEIF1AD
Cancer3DEIF1AD(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETEIF1AD
MedgenEIF1AD
Genetic Testing Registry EIF1AD
NextProtQ8N9N8 [Medical]
TSGene84285
GENETestsEIF1AD
Target ValidationEIF1AD
Huge Navigator EIF1AD [HugePedia]
snp3D : Map Gene to Disease84285
BioCentury BCIQEIF1AD
ClinGenEIF1AD
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84285
Chemical/Pharm GKB GenePA162384553
Clinical trialEIF1AD
Miscellaneous
canSAR (ICR)EIF1AD (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEIF1AD
EVEXEIF1AD
GoPubMedEIF1AD
iHOPEIF1AD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:23:20 CET 2017

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