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EIF1AX (eukaryotic translation initiation factor 1A, X-linked)

Identity

Other namesEIF1A
EIF1AP1
EIF4C
eIF-1A
eIF-4C
HGNC (Hugo) EIF1AX
LocusID (NCBI) 1964
Location Xp22.12
Location_base_pair Starts at 20142636 and ends at 20159966 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)EIF1AX   3250
Entrez_Gene (NCBI)EIF1AX  1964  eukaryotic translation initiation factor 1A, X-linked
Cards
GeneCards (Weizmann)EIF1AX
Ensembl (Hinxton)ENSG00000173674 [Gene_View]  chrX:20142636-20159966 [Contig_View]  EIF1AX [Vega]
AceView (NCBI)EIF1AX
Genatlas (Paris)EIF1AX
SOURCE (Stanford)NM_001412
Genomic and cartography
GoldenPath (UCSC)EIF1AX  -  Xp22.12   chrX:20142636-20159966 -  Xp22.12   [Description]    (hg19-Feb_2009)
EnsemblEIF1AX - Xp22.12 [CytoView]
Mapping of homologs : NCBIEIF1AX [Mapview]
OMIM300186   
Gene and transcription
Genbank (Entrez)AK312320 AL079283 AL832930 BC000793 BC047573
RefSeq transcript (SRS)NM_001412
RefSeq transcript (Entrez)NM_001412
RefSeq genomic (SRS)AC_000155 NC_000023 NC_018934 NT_167197 NW_001842360 NW_004078118
RefSeq genomic (Entrez)AC_000155 NC_000023 NC_018934 NT_167197 NW_001842360 NW_004078118
Consensus coding sequences : CCDS (NCBI)EIF1AX
Cluster EST : UnigeneHs.522590 [ SRS ] Hs.522590 [ NCBI ]
CGAP (NCI)Hs.522590
Alternative Splicing : Fast-db (Paris)GSHG0032009
Alternative Splicing GalleryENSG00000173674
Gene ExpressionEIF1AX [ NCBI-GEO ]   EIF1AX [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP47813 (SRS) P47813 (Uniprot)
NextProtP47813
With graphics : InterProP47813
Splice isoforms : SwissVarP47813(Swissvar)
Domaine pattern : Prosite (SRS)IF1A (PS01262)    S1_IF1_TYPE (PS50832)   
Domaine pattern : Prosite (Expaxy)IF1A (PS01262)    S1_IF1_TYPE (PS50832)   
Domains : Interpro (SRS)NA-bd_OB-fold    NA-bd_OB-fold-like    RNA-binding_domain_S1_IF1    TIF_eIF-1A    TIF_eIF-1A_CS   
Domains : Interpro (EBI)NA-bd_OB-fold    NA-bd_OB-fold-like    RNA-binding_domain_S1_IF1    TIF_eIF-1A    TIF_eIF-1A_CS   
Related proteins : CluSTrP47813
Domain families : Pfam (SRS)eIF-1a (PF01176)   
Domain families : Pfam (Sanger)eIF-1a (PF01176)   
Domain families : Pfam (NCBI)pfam01176   
Domain families : Smart (EMBL)eIF1a (SM00652)  
Domain structure : Prodom (Prabi Lyon)TIF_eIF-1A (PD005579)   
DMDM1964
Blocks (Seattle)P47813
PDB (SRS)1D7Q   
PDB (PDBSum)1D7Q   
PDB (IMB)1D7Q   
PDB (RSDB)1D7Q   
Human Protein AtlasENSG00000173674
HPRD02174
IPIIPI00232533   IPI00642387   
Protein Interaction databases
DIP (DOE-UCLA)P47813
IntAct (EBI)P47813
FunCoupENSG00000173674
REACTOMEEIF1AX
Protein Interaction Database1964
BioGRIDEIF1AX
InParanoidP47813
Interologous Interaction database P47813
IntegromeDBEIF1AX
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)EIF1AX
SNP (GeneSNP Utah)EIF1AX
SNP : HGBaseEIF1AX
Genetic variants : HAPMAPEIF1AX
Somatic Mutations in Cancer : COSMICEIF1AX 
CONAN: Copy Number AnalysisEIF1AX 
Mutations and Diseases : HGMDEIF1AX
OMIM300186   
GENETests300186   
Disease Genetic AssociationEIF1AX
Huge Navigator EIF1AX [HugePedia]  EIF1AX [HugeCancerGEM]
Genomic VariantsEIF1AX  EIF1AX [DGVbeta]
snp3D : Map Gene to Disease1964
General knowledge
Homologs : HomoloGeneEIF1AX
Homology/Alignments : Family Browser (UCSC)EIF1AX
Phylogenetic Trees/Animal Genes : TreeFamEIF1AX
Chemical/Protein Interactions : CTD1964
Chemical/Pharm GKB GenePA27684
Clinical trialEIF1AX
Cancer Resource (Charite)ENSG00000173674
Ontology : AmiGOtranslation initiation factor activity  cytosol  translation  translational initiation  translation factor activity, nucleic acid binding  gene expression  cellular protein metabolic process  
Ontology : EGO-EBItranslation initiation factor activity  cytosol  translation  translational initiation  translation factor activity, nucleic acid binding  gene expression  cellular protein metabolic process  
Pathways : BIOCARTAVEGF, Hypoxia, and Angiogenesis [Genes]    Eukaryotic protein translation [Genes]   
Other databases
Probes
Litterature
PubMed26 Pubmed reference(s) in Entrez
PubGeneEIF1AX
iHOPEIF1AX
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:40:38 CEST 2013
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