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EIF1AY (eukaryotic translation initiation factor 1A, Y-linked)

Identity

Alias_nameseukaryotic translation initiation factor 1A, Y chromosome
Other aliaseIF-4C
HGNC (Hugo) EIF1AY
LocusID (NCBI) 9086
Atlas_Id 62769
Location Yq11.223  [Link to chromosome band Yq11]
Location_base_pair Starts at 20575711 and ends at 20593154 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
EIF1AY (Yq11.223) / EIF1AY (Yq11.223)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EIF1AY   3252
Cards
Entrez_Gene (NCBI)EIF1AY  9086  eukaryotic translation initiation factor 1A, Y-linked
AliaseseIF-4C
GeneCards (Weizmann)EIF1AY
Ensembl hg19 (Hinxton)ENSG00000198692 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198692 [Gene_View]  chrY:20575711-20593154 [Contig_View]  EIF1AY [Vega]
ICGC DataPortalENSG00000198692
TCGA cBioPortalEIF1AY
AceView (NCBI)EIF1AY
Genatlas (Paris)EIF1AY
WikiGenes9086
SOURCE (Princeton)EIF1AY
Genetics Home Reference (NIH)EIF1AY
Genomic and cartography
GoldenPath hg38 (UCSC)EIF1AY  -     chrY:20575711-20593154 +  Yq11.223   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EIF1AY  -     Yq11.223   [Description]    (hg19-Feb_2009)
EnsemblEIF1AY - Yq11.223 [CytoView hg19]  EIF1AY - Yq11.223 [CytoView hg38]
Mapping of homologs : NCBIEIF1AY [Mapview hg19]  EIF1AY [Mapview hg38]
OMIM400014   
Gene and transcription
Genbank (Entrez)AF000987 AK127664 BC005248 BF694967 BG499107
RefSeq transcript (Entrez)NM_001278612 NM_004681
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EIF1AY
Cluster EST : UnigeneHs.461178 [ NCBI ]
CGAP (NCI)Hs.461178
Alternative Splicing GalleryENSG00000198692
Gene ExpressionEIF1AY [ NCBI-GEO ]   EIF1AY [ EBI - ARRAY_EXPRESS ]   EIF1AY [ SEEK ]   EIF1AY [ MEM ]
Gene Expression Viewer (FireBrowse)EIF1AY [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9086
GTEX Portal (Tissue expression)EIF1AY
Protein : pattern, domain, 3D structure
UniProt/SwissProtO14602   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO14602  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO14602
Splice isoforms : SwissVarO14602
PhosPhoSitePlusO14602
Domaine pattern : Prosite (Expaxy)IF1A (PS01262)    S1_IF1_TYPE (PS50832)   
Domains : Interpro (EBI)NA-bd_OB-fold    RNA-binding_domain_S1_IF1    TIF_eIF-1A    TIF_eIF-1A_CS   
Domain families : Pfam (Sanger)eIF-1a (PF01176)   
Domain families : Pfam (NCBI)pfam01176   
Domain families : Smart (EMBL)eIF1a (SM00652)  
Domain structure : Prodom (Prabi Lyon)TIF_eIF-1A (PD005579)   
Conserved Domain (NCBI)EIF1AY
DMDM Disease mutations9086
Blocks (Seattle)EIF1AY
SuperfamilyO14602
Human Protein AtlasENSG00000198692
Peptide AtlasO14602
HPRD02455
IPIIPI00023004   IPI00647118   
Protein Interaction databases
DIP (DOE-UCLA)O14602
IntAct (EBI)O14602
FunCoupENSG00000198692
BioGRIDEIF1AY
STRING (EMBL)EIF1AY
ZODIACEIF1AY
Ontologies - Pathways
QuickGOO14602
Ontology : AmiGOtranslation initiation factor activity  protein binding  translational initiation  
Ontology : EGO-EBItranslation initiation factor activity  protein binding  translational initiation  
Pathways : KEGGRNA transport   
NDEx NetworkEIF1AY
Atlas of Cancer Signalling NetworkEIF1AY
Wikipedia pathwaysEIF1AY
Orthology - Evolution
OrthoDB9086
GeneTree (enSembl)ENSG00000198692
Phylogenetic Trees/Animal Genes : TreeFamEIF1AY
HOVERGENO14602
HOGENOMO14602
Homologs : HomoloGeneEIF1AY
Homology/Alignments : Family Browser (UCSC)EIF1AY
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEIF1AY [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EIF1AY
dbVarEIF1AY
ClinVarEIF1AY
1000_GenomesEIF1AY 
Exome Variant ServerEIF1AY
ExAC (Exome Aggregation Consortium)EIF1AY (select the gene name)
Genetic variants : HAPMAP9086
Genomic Variants (DGV)EIF1AY [DGVbeta]
DECIPHEREIF1AY [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisEIF1AY 
Mutations
ICGC Data PortalEIF1AY 
TCGA Data PortalEIF1AY 
Broad Tumor PortalEIF1AY
OASIS PortalEIF1AY [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICEIF1AY  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDEIF1AY
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch EIF1AY
DgiDB (Drug Gene Interaction Database)EIF1AY
DoCM (Curated mutations)EIF1AY (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EIF1AY (select a term)
intoGenEIF1AY
Cancer3DEIF1AY(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM400014   
Orphanet
MedgenEIF1AY
Genetic Testing Registry EIF1AY
NextProtO14602 [Medical]
TSGene9086
GENETestsEIF1AY
Target ValidationEIF1AY
Huge Navigator EIF1AY [HugePedia]
snp3D : Map Gene to Disease9086
BioCentury BCIQEIF1AY
ClinGenEIF1AY
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9086
Chemical/Pharm GKB GenePA27686
Clinical trialEIF1AY
Miscellaneous
canSAR (ICR)EIF1AY (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEIF1AY
EVEXEIF1AY
GoPubMedEIF1AY
iHOPEIF1AY
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:46:55 CEST 2017

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