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EIF4ENIF1 (eukaryotic translation initiation factor 4E nuclear import factor 1)

Identity

Alias_symbol (synonym)4E-T
FLJ21601
Clast4
2610509L04Rik
Other alias
HGNC (Hugo) EIF4ENIF1
LocusID (NCBI) 56478
Atlas_Id 62785
Location 22q12.2  [Link to chromosome band 22q12]
Location_base_pair Starts at 31835345 and ends at 31885547 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
PICK1 (22q13.1) / EIF4ENIF1 (22q12.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EIF4ENIF1   16687
Cards
Entrez_Gene (NCBI)EIF4ENIF1  56478  eukaryotic translation initiation factor 4E nuclear import factor 1
Aliases4E-T; Clast4
GeneCards (Weizmann)EIF4ENIF1
Ensembl hg19 (Hinxton)ENSG00000184708 [Gene_View]  chr22:31835345-31885547 [Contig_View]  EIF4ENIF1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000184708 [Gene_View]  chr22:31835345-31885547 [Contig_View]  EIF4ENIF1 [Vega]
ICGC DataPortalENSG00000184708
TCGA cBioPortalEIF4ENIF1
AceView (NCBI)EIF4ENIF1
Genatlas (Paris)EIF4ENIF1
WikiGenes56478
SOURCE (Princeton)EIF4ENIF1
Genetics Home Reference (NIH)EIF4ENIF1
Genomic and cartography
GoldenPath hg19 (UCSC)EIF4ENIF1  -     chr22:31835345-31885547 -  22q12.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)EIF4ENIF1  -     22q12.2   [Description]    (hg38-Dec_2013)
EnsemblEIF4ENIF1 - 22q12.2 [CytoView hg19]  EIF4ENIF1 - 22q12.2 [CytoView hg38]
Mapping of homologs : NCBIEIF4ENIF1 [Mapview hg19]  EIF4ENIF1 [Mapview hg38]
OMIM607445   
Gene and transcription
Genbank (Entrez)AA609351 AF240775 AK025254 AK074768 AK130061
RefSeq transcript (Entrez)NM_001164501 NM_001164502 NM_019843
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_011520 NW_004929430
Consensus coding sequences : CCDS (NCBI)EIF4ENIF1
Cluster EST : UnigeneHs.517559 [ NCBI ]
CGAP (NCI)Hs.517559
Alternative Splicing GalleryENSG00000184708
Gene ExpressionEIF4ENIF1 [ NCBI-GEO ]   EIF4ENIF1 [ EBI - ARRAY_EXPRESS ]   EIF4ENIF1 [ SEEK ]   EIF4ENIF1 [ MEM ]
Gene Expression Viewer (FireBrowse)EIF4ENIF1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56478
GTEX Portal (Tissue expression)EIF4ENIF1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NRA8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NRA8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NRA8
Splice isoforms : SwissVarQ9NRA8
PhosPhoSitePlusQ9NRA8
Domains : Interpro (EBI)eIF4E_transporter   
Domain families : Pfam (Sanger)EIF4E-T (PF10477)   
Domain families : Pfam (NCBI)pfam10477   
Conserved Domain (NCBI)EIF4ENIF1
DMDM Disease mutations56478
Blocks (Seattle)EIF4ENIF1
SuperfamilyQ9NRA8
Human Protein AtlasENSG00000184708
Peptide AtlasQ9NRA8
HPRD10456
IPIIPI00291800   IPI00550518   IPI00644662   IPI00414095   IPI00645199   IPI00889521   IPI00880203   IPI00893675   
Protein Interaction databases
DIP (DOE-UCLA)Q9NRA8
IntAct (EBI)Q9NRA8
FunCoupENSG00000184708
BioGRIDEIF4ENIF1
STRING (EMBL)EIF4ENIF1
ZODIACEIF4ENIF1
Ontologies - Pathways
QuickGOQ9NRA8
Ontology : AmiGOprotein binding  nucleus  cytoplasm  cytosol  protein transporter activity  protein transport  membrane  PML body  nuclear speck  intracellular membrane-bounded organelle  poly(A) RNA binding  
Ontology : EGO-EBIprotein binding  nucleus  cytoplasm  cytosol  protein transporter activity  protein transport  membrane  PML body  nuclear speck  intracellular membrane-bounded organelle  poly(A) RNA binding  
NDEx NetworkEIF4ENIF1
Atlas of Cancer Signalling NetworkEIF4ENIF1
Wikipedia pathwaysEIF4ENIF1
Orthology - Evolution
OrthoDB56478
GeneTree (enSembl)ENSG00000184708
Phylogenetic Trees/Animal Genes : TreeFamEIF4ENIF1
HOVERGENQ9NRA8
HOGENOMQ9NRA8
Homologs : HomoloGeneEIF4ENIF1
Homology/Alignments : Family Browser (UCSC)EIF4ENIF1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEIF4ENIF1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EIF4ENIF1
dbVarEIF4ENIF1
ClinVarEIF4ENIF1
1000_GenomesEIF4ENIF1 
Exome Variant ServerEIF4ENIF1
ExAC (Exome Aggregation Consortium)EIF4ENIF1 (select the gene name)
Genetic variants : HAPMAP56478
Genomic Variants (DGV)EIF4ENIF1 [DGVbeta]
DECIPHER (Syndromes)22:31835345-31885547  ENSG00000184708
CONAN: Copy Number AnalysisEIF4ENIF1 
Mutations
ICGC Data PortalEIF4ENIF1 
TCGA Data PortalEIF4ENIF1 
Broad Tumor PortalEIF4ENIF1
OASIS PortalEIF4ENIF1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICEIF4ENIF1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDEIF4ENIF1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch EIF4ENIF1
DgiDB (Drug Gene Interaction Database)EIF4ENIF1
DoCM (Curated mutations)EIF4ENIF1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EIF4ENIF1 (select a term)
intoGenEIF4ENIF1
Cancer3DEIF4ENIF1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607445   
Orphanet
MedgenEIF4ENIF1
Genetic Testing Registry EIF4ENIF1
NextProtQ9NRA8 [Medical]
TSGene56478
GENETestsEIF4ENIF1
Huge Navigator EIF4ENIF1 [HugePedia]
snp3D : Map Gene to Disease56478
BioCentury BCIQEIF4ENIF1
ClinGenEIF4ENIF1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56478
Chemical/Pharm GKB GenePA38410
Clinical trialEIF4ENIF1
Miscellaneous
canSAR (ICR)EIF4ENIF1 (select the gene name)
Probes
Litterature
PubMed36 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEIF4ENIF1
EVEXEIF4ENIF1
GoPubMedEIF4ENIF1
iHOPEIF4ENIF1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:02:43 CET 2017

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