Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ELF3-AS1 (ELF3 antisense RNA 1)

Identity

Alias_symbol (synonym)ENST00000415582
Other alias-
HGNC (Hugo) ELF3-AS1
LocusID (NCBI) 102723465
Atlas_Id 79698
Location 1q32.1  [Link to chromosome band 1q32]
Location_base_pair Starts at 202000051 and ends at 202010353 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ELF3-AS1   40211
Cards
Entrez_Gene (NCBI)ELF3-AS1  102723465  ELF3 antisense RNA 1
Aliases
GeneCards (Weizmann)ELF3-AS1
Ensembl hg19 (Hinxton)ENSG00000234678 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234678 [Gene_View]  chr1:202000051-202010353 [Contig_View]  ELF3-AS1 [Vega]
ICGC DataPortalENSG00000234678
TCGA cBioPortalELF3-AS1
AceView (NCBI)ELF3-AS1
Genatlas (Paris)ELF3-AS1
WikiGenes102723465
SOURCE (Princeton)ELF3-AS1
Genetics Home Reference (NIH)ELF3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ELF3-AS1  -     chr1:202000051-202010353 -  1q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ELF3-AS1  -     1q32.1   [Description]    (hg19-Feb_2009)
EnsemblELF3-AS1 - 1q32.1 [CytoView hg19]  ELF3-AS1 - 1q32.1 [CytoView hg38]
Mapping of homologs : NCBIELF3-AS1 [Mapview hg19]  ELF3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA456584
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ELF3-AS1
Cluster EST : UnigeneHs.661033 [ NCBI ]
CGAP (NCI)Hs.661033
Alternative Splicing GalleryENSG00000234678
Gene ExpressionELF3-AS1 [ NCBI-GEO ]   ELF3-AS1 [ EBI - ARRAY_EXPRESS ]   ELF3-AS1 [ SEEK ]   ELF3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ELF3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102723465
GTEX Portal (Tissue expression)ELF3-AS1
Human Protein AtlasENSG00000234678-ELF3-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ELF3-AS1
DMDM Disease mutations102723465
Blocks (Seattle)ELF3-AS1
Human Protein Atlas [tissue]ENSG00000234678-ELF3-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000234678
BioGRIDELF3-AS1
STRING (EMBL)ELF3-AS1
ZODIACELF3-AS1
Ontologies - Pathways
Huge Navigator ELF3-AS1 [HugePedia]
snp3D : Map Gene to Disease102723465
BioCentury BCIQELF3-AS1
ClinGenELF3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102723465
Clinical trialELF3-AS1
Miscellaneous
canSAR (ICR)ELF3-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineELF3-AS1
EVEXELF3-AS1
GoPubMedELF3-AS1
iHOPELF3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 12:59:58 CET 2017

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