Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ELFN1-AS1 (ELFN1 antisense RNA 1)

Identity

Alias (NCBI)MYCLo-2
HGNC (Hugo) ELFN1-AS1
HGNC Alias symbMYCLo-2
LocusID (NCBI) 101927125
Atlas_Id 62792
Location 7p22.3  [Link to chromosome band 7p22]
Location_base_pair Starts at 1738631 and ends at 1742310 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ELFN1-AS1   39071
Cards
Entrez_Gene (NCBI)ELFN1-AS1  101927125  ELFN1 antisense RNA 1
AliasesMYCLo-2
GeneCards (Weizmann)ELFN1-AS1
Ensembl hg19 (Hinxton)ENSG00000236081 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236081 [Gene_View]  ENSG00000236081 [Sequence]  chr7:1738631-1742310 [Contig_View]  ELFN1-AS1 [Vega]
ICGC DataPortalENSG00000236081
TCGA cBioPortalELFN1-AS1
AceView (NCBI)ELFN1-AS1
Genatlas (Paris)ELFN1-AS1
WikiGenes101927125
SOURCE (Princeton)ELFN1-AS1
Genetics Home Reference (NIH)ELFN1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ELFN1-AS1  -     chr7:1738631-1742310 -  7p22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ELFN1-AS1  -     7p22.3   [Description]    (hg19-Feb_2009)
GoldenPathELFN1-AS1 - 7p22.3 [CytoView hg19]  ELFN1-AS1 - 7p22.3 [CytoView hg38]
ImmunoBaseENSG00000236081
genome Data Viewer NCBIELFN1-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BF665480 HO663747 HY180852 JX046910
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ELFN1-AS1
Alternative Splicing GalleryENSG00000236081
Gene ExpressionELFN1-AS1 [ NCBI-GEO ]   ELFN1-AS1 [ EBI - ARRAY_EXPRESS ]   ELFN1-AS1 [ SEEK ]   ELFN1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ELFN1-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of ELFN1-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101927125
GTEX Portal (Tissue expression)ELFN1-AS1
Human Protein AtlasENSG00000236081-ELFN1-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ELFN1-AS1
DMDM Disease mutations101927125
Blocks (Seattle)ELFN1-AS1
Human Protein Atlas [tissue]ENSG00000236081-ELFN1-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000236081
BioGRIDELFN1-AS1
STRING (EMBL)ELFN1-AS1
ZODIACELFN1-AS1
Ontologies - Pathways
Huge Navigator ELFN1-AS1 [HugePedia]
snp3D : Map Gene to Disease101927125
BioCentury BCIQELFN1-AS1
ClinGenELFN1-AS1
Clinical trials, drugs, therapy
Protein Interactions : CTD101927125
Clinical trialELFN1-AS1
Miscellaneous
canSAR (ICR)ELFN1-AS1 (select the gene name)
HarmonizomeELFN1-AS1
DataMed IndexELFN1-AS1
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineELFN1-AS1
EVEXELFN1-AS1
GoPubMedELFN1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Aug 22 19:10:39 CEST 2020

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