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ELMOD3 (ELMO domain containing 3)

Identity

Alias (NCBI)DFNB88
LST3
RBED1
RBM29
HGNC (Hugo) ELMOD3
HGNC Alias symbFLJ21977
HGNC Previous nameRBM29
 RBED1
 DFNB88
HGNC Previous nameRNA binding motif protein 29
 RNA binding motif and ELMO/CED-12 domain 1
 deafness, autosomal recessive 88
 ELMO/CED-12 domain containing 3
LocusID (NCBI) 84173
Atlas_Id 54280
Location 2p11.2  [Link to chromosome band 2p11]
Location_base_pair Starts at 85354769 and ends at 85391748 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ELMOD3 (2p11.2) / TCF7L1 (2p11.2)ELMOD3 (2p11.2) / TTC27 (2p22.3)RSAD2 (2p25.2) / ELMOD3 (2p11.2)
USP39 (2p11.2) / ELMOD3 (2p11.2)ELMOD3 2p11.2 / TCF7L1 2p11.2ELMOD3 2p11.2 / TTC27 2p22.3
USP39 2p11.2 / ELMOD3 2p11.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(2;2)(p11;p25) RSAD2/ELMOD3


External links

Nomenclature
HGNC (Hugo)ELMOD3   26158
Cards
Entrez_Gene (NCBI)ELMOD3    ELMO domain containing 3
AliasesDFNB88; LST3; RBED1; RBM29
GeneCards (Weizmann)ELMOD3
Ensembl hg19 (Hinxton)ENSG00000115459 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000115459 [Gene_View]  ENSG00000115459 [Sequence]  chr2:85354769-85391748 [Contig_View]  ELMOD3 [Vega]
ICGC DataPortalENSG00000115459
TCGA cBioPortalELMOD3
AceView (NCBI)ELMOD3
Genatlas (Paris)ELMOD3
SOURCE (Princeton)ELMOD3
Genetics Home Reference (NIH)ELMOD3
Genomic and cartography
GoldenPath hg38 (UCSC)ELMOD3  -     chr2:85354769-85391748 +  2p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ELMOD3  -     2p11.2   [Description]    (hg19-Feb_2009)
GoldenPathELMOD3 - 2p11.2 [CytoView hg19]  ELMOD3 - 2p11.2 [CytoView hg38]
ImmunoBaseENSG00000115459
Genome Data Viewer NCBIELMOD3 [Mapview hg19]  
OMIM615427   615429   
Gene and transcription
Genbank (Entrez)AF258573 AK092920 AK307252 AL713718 BC001942
RefSeq transcript (Entrez)NM_001135021 NM_001135022 NM_001135023 NM_001329791 NM_001329792 NM_001329793 NM_032213
Consensus coding sequences : CCDS (NCBI)ELMOD3
Gene ExpressionELMOD3 [ NCBI-GEO ]   ELMOD3 [ EBI - ARRAY_EXPRESS ]   ELMOD3 [ SEEK ]   ELMOD3 [ MEM ]
Gene Expression Viewer (FireBrowse)ELMOD3 [ Firebrowse - Broad ]
GenevisibleExpression of ELMOD3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84173
GTEX Portal (Tissue expression)ELMOD3
Human Protein AtlasENSG00000115459-ELMOD3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ELMOD3
Human Protein Atlas [tissue]ENSG00000115459-ELMOD3 [tissue]
HPRD07973
Protein Interaction databases
BioGRIDELMOD3
STRING (EMBL)ELMOD3
ZODIACELMOD3
Ontologies - Pathways
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXELMOD3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:08:03 CEST 2021

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