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ELOA2 (elongin A2)

Identity

Other aliasHsT832
TCEB3B
TCEB3L
HGNC (Hugo) ELOA2
LocusID (NCBI) 51224
Atlas_Id 78677
Location 18q21.1  [Link to chromosome band 18q21]
Location_base_pair Starts at 44558943 and ends at 44561988 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)ELOA2   30771
Cards
Entrez_Gene (NCBI)ELOA2  51224  elongin A2
AliasesHsT832; TCEB3B; TCEB3L
GeneCards (Weizmann)ELOA2
Ensembl hg19 (Hinxton) [Gene_View]  chr18:44558943-44561988 [Contig_View]  ELOA2 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr18:44558943-44561988 [Contig_View]  ELOA2 [Vega]
TCGA cBioPortalELOA2
AceView (NCBI)ELOA2
Genatlas (Paris)ELOA2
WikiGenes51224
SOURCE (Princeton)ELOA2
Genetics Home Reference (NIH)ELOA2
Genomic and cartography
GoldenPath hg19 (UCSC)ELOA2  -     chr18:44558943-44561988 -  18q21.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ELOA2  -     18q21.1   [Description]    (hg38-Dec_2013)
EnsemblELOA2 - 18q21.1 [CytoView hg19]  ELOA2 - 18q21.1 [CytoView hg38]
Mapping of homologs : NCBIELOA2 [Mapview hg19]  ELOA2 [Mapview hg38]
OMIM609522   
Gene and transcription
Genbank (Entrez)AB030834 AK314984 BC036022 BC103911 JF432262
RefSeq transcript (Entrez)NM_016427
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ELOA2
Cluster EST : UnigeneHs.375035 [ NCBI ]
CGAP (NCI)Hs.375035
Gene ExpressionELOA2 [ NCBI-GEO ]   ELOA2 [ EBI - ARRAY_EXPRESS ]   ELOA2 [ SEEK ]   ELOA2 [ MEM ]
Gene Expression Viewer (FireBrowse)ELOA2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51224
GTEX Portal (Tissue expression)ELOA2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IYF1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IYF1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IYF1
Splice isoforms : SwissVarQ8IYF1
PhosPhoSitePlusQ8IYF1
Domaine pattern : Prosite (Expaxy)TFIIS_N (PS51319)   
Domains : Interpro (EBI)RNA_pol_II_trans_fac_SIII_A    TFIIS/CRSP70_N_sub    TFIIS_N   
Domain families : Pfam (Sanger)Elongin_A (PF06881)    Med26 (PF08711)   
Domain families : Pfam (NCBI)pfam06881    pfam08711   
Domain families : Smart (EMBL)TFS2N (SM00509)  
Conserved Domain (NCBI)ELOA2
DMDM Disease mutations51224
Blocks (Seattle)ELOA2
SuperfamilyQ8IYF1
Peptide AtlasQ8IYF1
HPRD18169
IPIIPI00376867   
Protein Interaction databases
DIP (DOE-UCLA)Q8IYF1
IntAct (EBI)Q8IYF1
BioGRIDELOA2
STRING (EMBL)ELOA2
ZODIACELOA2
Ontologies - Pathways
QuickGOQ8IYF1
Ontology : AmiGOprotein binding  transcription from RNA polymerase II promoter  transcription elongation from RNA polymerase II promoter  integral component of membrane  regulation of DNA-templated transcription, elongation  elongin complex  
Ontology : EGO-EBIprotein binding  transcription from RNA polymerase II promoter  transcription elongation from RNA polymerase II promoter  integral component of membrane  regulation of DNA-templated transcription, elongation  elongin complex  
NDEx NetworkELOA2
Atlas of Cancer Signalling NetworkELOA2
Wikipedia pathwaysELOA2
Orthology - Evolution
OrthoDB51224
Phylogenetic Trees/Animal Genes : TreeFamELOA2
HOVERGENQ8IYF1
HOGENOMQ8IYF1
Homologs : HomoloGeneELOA2
Homology/Alignments : Family Browser (UCSC)ELOA2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerELOA2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ELOA2
dbVarELOA2
ClinVarELOA2
1000_GenomesELOA2 
Exome Variant ServerELOA2
ExAC (Exome Aggregation Consortium)ELOA2 (select the gene name)
Genetic variants : HAPMAP51224
Genomic Variants (DGV)ELOA2 [DGVbeta]
DECIPHER (Syndromes)18:44558943-44561988  
CONAN: Copy Number AnalysisELOA2 
Mutations
ICGC Data PortalELOA2 
TCGA Data PortalELOA2 
Broad Tumor PortalELOA2
OASIS PortalELOA2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDELOA2
BioMutasearch ELOA2
DgiDB (Drug Gene Interaction Database)ELOA2
DoCM (Curated mutations)ELOA2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ELOA2 (select a term)
intoGenELOA2
Cancer3DELOA2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609522   
Orphanet
MedgenELOA2
Genetic Testing Registry ELOA2
NextProtQ8IYF1 [Medical]
TSGene51224
GENETestsELOA2
Huge Navigator ELOA2 [HugePedia]
snp3D : Map Gene to Disease51224
BioCentury BCIQELOA2
ClinGenELOA2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51224
Chemical/Pharm GKB GenePA134932220
Clinical trialELOA2
Miscellaneous
canSAR (ICR)ELOA2 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineELOA2
EVEXELOA2
GoPubMedELOA2
iHOPELOA2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:02:46 CET 2017

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