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ELOA3 (elongin A3)

Identity

Alias_namesTCEB3C
transcription elongation factor B polypeptide 3C (elongin A3)
transcription elongation factor B subunit 3C
Alias_symbol (synonym)HsT829
TCEB3L2
ELOA3A
Other alias
HGNC (Hugo) ELOA3
LocusID (NCBI) 162699
Atlas_Id 79055
Location 18q21.1  [Link to chromosome band 18q21]
Location_base_pair Starts at 47022287 and ends at 47024163 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)ELOA3   24617
Cards
Entrez_Gene (NCBI)ELOA3  162699  elongin A3
AliasesELOA3A; HsT829; TCEB3C; TCEB3L2
GeneCards (Weizmann)ELOA3
Ensembl hg19 (Hinxton)ENSG00000183791 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183791 [Gene_View]  chr18:47022287-47024163 [Contig_View]  ELOA3 [Vega]
ICGC DataPortalENSG00000183791
TCGA cBioPortalELOA3
AceView (NCBI)ELOA3
Genatlas (Paris)ELOA3
WikiGenes162699
SOURCE (Princeton)ELOA3
Genetics Home Reference (NIH)ELOA3
Genomic and cartography
GoldenPath hg38 (UCSC)ELOA3  -     chr18:47022287-47024163 -  18q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ELOA3  -     18q21.1   [Description]    (hg19-Feb_2009)
EnsemblELOA3 - 18q21.1 [CytoView hg19]  ELOA3 - 18q21.1 [CytoView hg38]
Mapping of homologs : NCBIELOA3 [Mapview hg19]  ELOA3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC172326 BQ185879 EU446606
RefSeq transcript (Entrez)NM_145653
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ELOA3
Cluster EST : UnigeneHs.729823 [ NCBI ]
CGAP (NCI)Hs.729823
Alternative Splicing GalleryENSG00000183791
Gene ExpressionELOA3 [ NCBI-GEO ]   ELOA3 [ EBI - ARRAY_EXPRESS ]   ELOA3 [ SEEK ]   ELOA3 [ MEM ]
Gene Expression Viewer (FireBrowse)ELOA3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)162699
GTEX Portal (Tissue expression)ELOA3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NG57   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NG57  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NG57
Splice isoforms : SwissVarQ8NG57
PhosPhoSitePlusQ8NG57
Domaine pattern : Prosite (Expaxy)TFIIS_N (PS51319)   
Domains : Interpro (EBI)RNA_pol_II_trans_fac_SIII_A    TFIIS/CRSP70_N_sub    TFIIS_N   
Domain families : Pfam (Sanger)Elongin_A (PF06881)    Med26 (PF08711)   
Domain families : Pfam (NCBI)pfam06881    pfam08711   
Domain families : Smart (EMBL)TFS2N (SM00509)  
Conserved Domain (NCBI)ELOA3
DMDM Disease mutations162699
Blocks (Seattle)ELOA3
SuperfamilyQ8NG57
Human Protein AtlasENSG00000183791
Peptide AtlasQ8NG57
IPIIPI00168919   
Protein Interaction databases
DIP (DOE-UCLA)Q8NG57
IntAct (EBI)Q8NG57
FunCoupENSG00000183791
BioGRIDELOA3
STRING (EMBL)ELOA3
ZODIACELOA3
Ontologies - Pathways
QuickGOQ8NG57
Ontology : AmiGOnucleoplasm  regulation of transcription, DNA-templated  transcription from RNA polymerase II promoter  transcription elongation from RNA polymerase II promoter  transcription elongation from RNA polymerase II promoter  integral component of membrane  elongin complex  
Ontology : EGO-EBInucleoplasm  regulation of transcription, DNA-templated  transcription from RNA polymerase II promoter  transcription elongation from RNA polymerase II promoter  transcription elongation from RNA polymerase II promoter  integral component of membrane  elongin complex  
NDEx NetworkELOA3
Atlas of Cancer Signalling NetworkELOA3
Wikipedia pathwaysELOA3
Orthology - Evolution
OrthoDB162699
GeneTree (enSembl)ENSG00000183791
Phylogenetic Trees/Animal Genes : TreeFamELOA3
HOVERGENQ8NG57
HOGENOMQ8NG57
Homologs : HomoloGeneELOA3
Homology/Alignments : Family Browser (UCSC)ELOA3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerELOA3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ELOA3
dbVarELOA3
ClinVarELOA3
1000_GenomesELOA3 
Exome Variant ServerELOA3
ExAC (Exome Aggregation Consortium)ELOA3 (select the gene name)
Genetic variants : HAPMAP162699
Genomic Variants (DGV)ELOA3 [DGVbeta]
DECIPHERELOA3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisELOA3 
Mutations
ICGC Data PortalELOA3 
TCGA Data PortalELOA3 
Broad Tumor PortalELOA3
OASIS PortalELOA3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDELOA3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ELOA3
DgiDB (Drug Gene Interaction Database)ELOA3
DoCM (Curated mutations)ELOA3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ELOA3 (select a term)
intoGenELOA3
Cancer3DELOA3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenELOA3
Genetic Testing Registry ELOA3
NextProtQ8NG57 [Medical]
TSGene162699
GENETestsELOA3
Target ValidationELOA3
Huge Navigator ELOA3 [HugePedia]
snp3D : Map Gene to Disease162699
BioCentury BCIQELOA3
ClinGenELOA3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD162699
Chemical/Pharm GKB GenePA134940475
Clinical trialELOA3
Miscellaneous
canSAR (ICR)ELOA3 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineELOA3
EVEXELOA3
GoPubMedELOA3
iHOPELOA3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:07:01 CEST 2017

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