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ELOA3B (elongin A3 family member B)

Identity

Other aliasELOA3L1
EloA3C
HsT828
TCEB3CL
eloA3-like-1
HGNC (Hugo) ELOA3B
LocusID (NCBI) 728929
Atlas_Id 78603
Location 18q21.1  [Link to chromosome band 18q21]
Location_base_pair Starts at 46962768 and ends at 46964408 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ELOA3B   31007
Cards
Entrez_Gene (NCBI)ELOA3B  728929  elongin A3 family member B
AliasesELOA3L1; EloA3C; HsT828; TCEB3CL; 
eloA3-like-1
GeneCards (Weizmann)ELOA3B
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr18:46962768-46964408 [Contig_View]  ELOA3B [Vega]
TCGA cBioPortalELOA3B
AceView (NCBI)ELOA3B
Genatlas (Paris)ELOA3B
WikiGenes728929
SOURCE (Princeton)ELOA3B
Genetics Home Reference (NIH)ELOA3B
Genomic and cartography
GoldenPath hg38 (UCSC)ELOA3B  -     chr18:46962768-46964408 -  18q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ELOA3B  -     18q21.1   [Description]    (hg19-Feb_2009)
EnsemblELOA3B - 18q21.1 [CytoView hg19]  ELOA3B - 18q21.1 [CytoView hg38]
Mapping of homologs : NCBIELOA3B [Mapview hg19]  ELOA3B [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC103912 BC103913
RefSeq transcript (Entrez)NM_001100817
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ELOA3B
Cluster EST : UnigeneHs.745535 [ NCBI ]
CGAP (NCI)Hs.745535
Gene ExpressionELOA3B [ NCBI-GEO ]   ELOA3B [ EBI - ARRAY_EXPRESS ]   ELOA3B [ SEEK ]   ELOA3B [ MEM ]
Gene Expression Viewer (FireBrowse)ELOA3B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)728929
GTEX Portal (Tissue expression)ELOA3B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3SY89   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ3SY89  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ3SY89
Splice isoforms : SwissVarQ3SY89
PhosPhoSitePlusQ3SY89
Domaine pattern : Prosite (Expaxy)TFIIS_N (PS51319)   
Domains : Interpro (EBI)RNA_pol_II_trans_fac_SIII_A    TFIIS/CRSP70_N_sub    TFIIS_N   
Domain families : Pfam (Sanger)Elongin_A (PF06881)    Med26 (PF08711)   
Domain families : Pfam (NCBI)pfam06881    pfam08711   
Domain families : Smart (EMBL)TFS2N (SM00509)  
Conserved Domain (NCBI)ELOA3B
DMDM Disease mutations728929
Blocks (Seattle)ELOA3B
SuperfamilyQ3SY89
Peptide AtlasQ3SY89
IPIIPI00735473   
Protein Interaction databases
DIP (DOE-UCLA)Q3SY89
IntAct (EBI)Q3SY89
BioGRIDELOA3B
STRING (EMBL)ELOA3B
ZODIACELOA3B
Ontologies - Pathways
QuickGOQ3SY89
Ontology : AmiGOnucleus  regulation of transcription, DNA-templated  transcription elongation from RNA polymerase II promoter  integral component of membrane  elongin complex  
Ontology : EGO-EBInucleus  regulation of transcription, DNA-templated  transcription elongation from RNA polymerase II promoter  integral component of membrane  elongin complex  
NDEx NetworkELOA3B
Atlas of Cancer Signalling NetworkELOA3B
Wikipedia pathwaysELOA3B
Orthology - Evolution
OrthoDB728929
Phylogenetic Trees/Animal Genes : TreeFamELOA3B
HOVERGENQ3SY89
HOGENOMQ3SY89
Homologs : HomoloGeneELOA3B
Homology/Alignments : Family Browser (UCSC)ELOA3B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerELOA3B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ELOA3B
dbVarELOA3B
ClinVarELOA3B
1000_GenomesELOA3B 
Exome Variant ServerELOA3B
ExAC (Exome Aggregation Consortium)ELOA3B (select the gene name)
Genetic variants : HAPMAP728929
Genomic Variants (DGV)ELOA3B [DGVbeta]
DECIPHERELOA3B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisELOA3B 
Mutations
ICGC Data PortalELOA3B 
TCGA Data PortalELOA3B 
Broad Tumor PortalELOA3B
OASIS PortalELOA3B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDELOA3B
BioMutasearch ELOA3B
DgiDB (Drug Gene Interaction Database)ELOA3B
DoCM (Curated mutations)ELOA3B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ELOA3B (select a term)
intoGenELOA3B
Cancer3DELOA3B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenELOA3B
Genetic Testing Registry ELOA3B
NextProtQ3SY89 [Medical]
TSGene728929
GENETestsELOA3B
Target ValidationELOA3B
Huge Navigator ELOA3B [HugePedia]
snp3D : Map Gene to Disease728929
BioCentury BCIQELOA3B
ClinGenELOA3B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728929
Chemical/Pharm GKB GenePA134878695
Clinical trialELOA3B
Miscellaneous
canSAR (ICR)ELOA3B (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineELOA3B
EVEXELOA3B
GoPubMedELOA3B
iHOPELOA3B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:07:01 CEST 2017

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