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ELOA3C (elongin A3 family member C)

Identity

Other alias-
HGNC (Hugo) ELOA3C
LocusID (NCBI) 107983955
Atlas_Id 79336
Location 18q21.1  [Link to chromosome band 18q21]
Location_base_pair Starts at 47028202 and ends at 47029838 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)ELOA3C   52410
Cards
Entrez_Gene (NCBI)ELOA3C  107983955  elongin A3 family member C
Aliases
GeneCards (Weizmann)ELOA3C
Ensembl hg19 (Hinxton)ENSG00000275553 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000275553 [Gene_View]  chr18:47028202-47029838 [Contig_View]  ELOA3C [Vega]
ICGC DataPortalENSG00000275553
TCGA cBioPortalELOA3C
AceView (NCBI)ELOA3C
Genatlas (Paris)ELOA3C
WikiGenes107983955
SOURCE (Princeton)ELOA3C
Genetics Home Reference (NIH)ELOA3C
Genomic and cartography
GoldenPath hg38 (UCSC)ELOA3C  -     chr18:47028202-47029838 -  18q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ELOA3C  -     18q21.1   [Description]    (hg19-Feb_2009)
EnsemblELOA3C - 18q21.1 [CytoView hg19]  ELOA3C - 18q21.1 [CytoView hg38]
Mapping of homologs : NCBIELOA3C [Mapview hg19]  ELOA3C [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC103912 BC103913
RefSeq transcript (Entrez)NM_001354366
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ELOA3C
Cluster EST : UnigeneHs.745535 [ NCBI ]
CGAP (NCI)Hs.745535
Alternative Splicing GalleryENSG00000275553
Gene ExpressionELOA3C [ NCBI-GEO ]   ELOA3C [ EBI - ARRAY_EXPRESS ]   ELOA3C [ SEEK ]   ELOA3C [ MEM ]
Gene Expression Viewer (FireBrowse)ELOA3C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)107983955
GTEX Portal (Tissue expression)ELOA3C
Protein : pattern, domain, 3D structure
UniProt/SwissProtA0A087WX78   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA0A087WX78  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA0A087WX78
Splice isoforms : SwissVarA0A087WX78
PhosPhoSitePlusA0A087WX78
Domains : Interpro (EBI)RNA_pol_II_trans_fac_SIII_A   
Domain families : Pfam (Sanger)Elongin_A (PF06881)   
Domain families : Pfam (NCBI)pfam06881   
Conserved Domain (NCBI)ELOA3C
DMDM Disease mutations107983955
Blocks (Seattle)ELOA3C
SuperfamilyA0A087WX78
Human Protein AtlasENSG00000275553
Peptide AtlasA0A087WX78
Protein Interaction databases
DIP (DOE-UCLA)A0A087WX78
IntAct (EBI)A0A087WX78
FunCoupENSG00000275553
BioGRIDELOA3C
STRING (EMBL)ELOA3C
ZODIACELOA3C
Ontologies - Pathways
QuickGOA0A087WX78
Ontology : AmiGOnucleus  regulation of transcription, DNA-templated  integral component of membrane  
Ontology : EGO-EBInucleus  regulation of transcription, DNA-templated  integral component of membrane  
NDEx NetworkELOA3C
Atlas of Cancer Signalling NetworkELOA3C
Wikipedia pathwaysELOA3C
Orthology - Evolution
OrthoDB107983955
GeneTree (enSembl)ENSG00000275553
Phylogenetic Trees/Animal Genes : TreeFamELOA3C
HOVERGENA0A087WX78
HOGENOMA0A087WX78
Homologs : HomoloGeneELOA3C
Homology/Alignments : Family Browser (UCSC)ELOA3C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerELOA3C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ELOA3C
dbVarELOA3C
ClinVarELOA3C
1000_GenomesELOA3C 
Exome Variant ServerELOA3C
ExAC (Exome Aggregation Consortium)ELOA3C (select the gene name)
Genetic variants : HAPMAP107983955
Genomic Variants (DGV)ELOA3C [DGVbeta]
DECIPHERELOA3C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisELOA3C 
Mutations
ICGC Data PortalELOA3C 
TCGA Data PortalELOA3C 
Broad Tumor PortalELOA3C
OASIS PortalELOA3C [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDELOA3C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ELOA3C
DgiDB (Drug Gene Interaction Database)ELOA3C
DoCM (Curated mutations)ELOA3C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ELOA3C (select a term)
intoGenELOA3C
Cancer3DELOA3C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenELOA3C
Genetic Testing Registry ELOA3C
NextProtA0A087WX78 [Medical]
TSGene107983955
GENETestsELOA3C
Target ValidationELOA3C
Huge Navigator ELOA3C [HugePedia]
snp3D : Map Gene to Disease107983955
BioCentury BCIQELOA3C
ClinGenELOA3C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD107983955
Clinical trialELOA3C
Miscellaneous
canSAR (ICR)ELOA3C (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineELOA3C
EVEXELOA3C
GoPubMedELOA3C
iHOPELOA3C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:07:01 CEST 2017

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