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ELOVL3 (ELOVL fatty acid elongase 3)

Identity

Alias_nameselongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3
Alias_symbol (synonym)CIG-30
Other aliasCIG30
HGNC (Hugo) ELOVL3
LocusID (NCBI) 83401
Atlas_Id 62803
Location 10q24.32  [Link to chromosome band 10q24]
Location_base_pair Starts at 102226278 and ends at 102229587 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ELOVL3   18047
Cards
Entrez_Gene (NCBI)ELOVL3  83401  ELOVL fatty acid elongase 3
AliasesCIG-30; CIG30
GeneCards (Weizmann)ELOVL3
Ensembl hg19 (Hinxton)ENSG00000119915 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000119915 [Gene_View]  chr10:102226278-102229587 [Contig_View]  ELOVL3 [Vega]
ICGC DataPortalENSG00000119915
TCGA cBioPortalELOVL3
AceView (NCBI)ELOVL3
Genatlas (Paris)ELOVL3
WikiGenes83401
SOURCE (Princeton)ELOVL3
Genetics Home Reference (NIH)ELOVL3
Genomic and cartography
GoldenPath hg38 (UCSC)ELOVL3  -     chr10:102226278-102229587 +  10q24.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ELOVL3  -     10q24.32   [Description]    (hg19-Feb_2009)
EnsemblELOVL3 - 10q24.32 [CytoView hg19]  ELOVL3 - 10q24.32 [CytoView hg38]
Mapping of homologs : NCBIELOVL3 [Mapview hg19]  ELOVL3 [Mapview hg38]
OMIM611815   
Gene and transcription
Genbank (Entrez)BC034344 HQ447376 HY050356
RefSeq transcript (Entrez)NM_152310
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ELOVL3
Cluster EST : UnigeneHs.302130 [ NCBI ]
CGAP (NCI)Hs.302130
Alternative Splicing GalleryENSG00000119915
Gene ExpressionELOVL3 [ NCBI-GEO ]   ELOVL3 [ EBI - ARRAY_EXPRESS ]   ELOVL3 [ SEEK ]   ELOVL3 [ MEM ]
Gene Expression Viewer (FireBrowse)ELOVL3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)83401
GTEX Portal (Tissue expression)ELOVL3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HB03   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HB03  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HB03
Splice isoforms : SwissVarQ9HB03
PhosPhoSitePlusQ9HB03
Domaine pattern : Prosite (Expaxy)ELO (PS01188)   
Domains : Interpro (EBI)ELO_CS    ELO_fam    ELOVL3   
Domain families : Pfam (Sanger)ELO (PF01151)   
Domain families : Pfam (NCBI)pfam01151   
Conserved Domain (NCBI)ELOVL3
DMDM Disease mutations83401
Blocks (Seattle)ELOVL3
SuperfamilyQ9HB03
Human Protein AtlasENSG00000119915
Peptide AtlasQ9HB03
HPRD16858
IPIIPI00054675   
Protein Interaction databases
DIP (DOE-UCLA)Q9HB03
IntAct (EBI)Q9HB03
FunCoupENSG00000119915
BioGRIDELOVL3
STRING (EMBL)ELOVL3
ZODIACELOVL3
Ontologies - Pathways
QuickGOQ9HB03
Ontology : AmiGOprotein binding  endoplasmic reticulum  endoplasmic reticulum membrane  unsaturated fatty acid biosynthetic process  fatty acid elongase activity  fatty acid elongase activity  integral component of membrane  fatty acid elongation, saturated fatty acid  fatty acid elongation, monounsaturated fatty acid  fatty acid elongation, polyunsaturated fatty acid  long-chain fatty-acyl-CoA biosynthetic process  alpha-linolenic acid metabolic process  very long-chain fatty acid biosynthetic process  linoleic acid metabolic process  3-oxo-arachidoyl-CoA synthase activity  3-oxo-cerotoyl-CoA synthase activity  3-oxo-lignoceronyl-CoA synthase activity  
Ontology : EGO-EBIprotein binding  endoplasmic reticulum  endoplasmic reticulum membrane  unsaturated fatty acid biosynthetic process  fatty acid elongase activity  fatty acid elongase activity  integral component of membrane  fatty acid elongation, saturated fatty acid  fatty acid elongation, monounsaturated fatty acid  fatty acid elongation, polyunsaturated fatty acid  long-chain fatty-acyl-CoA biosynthetic process  alpha-linolenic acid metabolic process  very long-chain fatty acid biosynthetic process  linoleic acid metabolic process  3-oxo-arachidoyl-CoA synthase activity  3-oxo-cerotoyl-CoA synthase activity  3-oxo-lignoceronyl-CoA synthase activity  
Pathways : KEGGFatty acid elongation   
NDEx NetworkELOVL3
Atlas of Cancer Signalling NetworkELOVL3
Wikipedia pathwaysELOVL3
Orthology - Evolution
OrthoDB83401
GeneTree (enSembl)ENSG00000119915
Phylogenetic Trees/Animal Genes : TreeFamELOVL3
HOVERGENQ9HB03
HOGENOMQ9HB03
Homologs : HomoloGeneELOVL3
Homology/Alignments : Family Browser (UCSC)ELOVL3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerELOVL3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ELOVL3
dbVarELOVL3
ClinVarELOVL3
1000_GenomesELOVL3 
Exome Variant ServerELOVL3
ExAC (Exome Aggregation Consortium)ELOVL3 (select the gene name)
Genetic variants : HAPMAP83401
Genomic Variants (DGV)ELOVL3 [DGVbeta]
DECIPHERELOVL3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisELOVL3 
Mutations
ICGC Data PortalELOVL3 
TCGA Data PortalELOVL3 
Broad Tumor PortalELOVL3
OASIS PortalELOVL3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICELOVL3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDELOVL3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ELOVL3
DgiDB (Drug Gene Interaction Database)ELOVL3
DoCM (Curated mutations)ELOVL3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ELOVL3 (select a term)
intoGenELOVL3
Cancer3DELOVL3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611815   
Orphanet
MedgenELOVL3
Genetic Testing Registry ELOVL3
NextProtQ9HB03 [Medical]
TSGene83401
GENETestsELOVL3
Target ValidationELOVL3
Huge Navigator ELOVL3 [HugePedia]
snp3D : Map Gene to Disease83401
BioCentury BCIQELOVL3
ClinGenELOVL3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD83401
Chemical/Pharm GKB GenePA27762
Clinical trialELOVL3
Miscellaneous
canSAR (ICR)ELOVL3 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineELOVL3
EVEXELOVL3
GoPubMedELOVL3
iHOPELOVL3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:47:03 CEST 2017

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