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ELOVL7 (ELOVL fatty acid elongase 7)

Identity

Alias (NCBI)-
HGNC (Hugo) ELOVL7
HGNC Alias symbFLJ23563
HGNC Previous nameELOVL family member 7, elongation of long chain fatty acids (yeast)
LocusID (NCBI) 79993
Atlas_Id 51307
Location 5q12.1  [Link to chromosome band 5q12]
Location_base_pair Starts at 60751791 and ends at 60844269 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DEPDC1B (5q12.1) / ELOVL7 (5q12.1)ELOVL7 (5q12.1) / DSE (6q22.1)ELOVL7 (5q12.1) / ELOVL7 (5q12.1)
PAFAH1B1 (17p13.3) / ELOVL7 (5q12.1)PDE4D (5q11.2) / ELOVL7 (5q12.1)PDE4D 5q11.2 / ELOVL7 5q12.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ELOVL7   26292
Cards
Entrez_Gene (NCBI)ELOVL7    ELOVL fatty acid elongase 7
Aliases
GeneCards (Weizmann)ELOVL7
Ensembl hg19 (Hinxton)ENSG00000164181 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164181 [Gene_View]  ENSG00000164181 [Sequence]  chr5:60751791-60844269 [Contig_View]  ELOVL7 [Vega]
ICGC DataPortalENSG00000164181
TCGA cBioPortalELOVL7
AceView (NCBI)ELOVL7
Genatlas (Paris)ELOVL7
SOURCE (Princeton)ELOVL7
Genetics Home Reference (NIH)ELOVL7
Genomic and cartography
GoldenPath hg38 (UCSC)ELOVL7  -     chr5:60751791-60844269 -  5q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ELOVL7  -     5q12.1   [Description]    (hg19-Feb_2009)
GoldenPathELOVL7 - 5q12.1 [CytoView hg19]  ELOVL7 - 5q12.1 [CytoView hg38]
ImmunoBaseENSG00000164181
Genome Data Viewer NCBIELOVL7 [Mapview hg19]  
OMIM614451   
Gene and transcription
Genbank (Entrez)AB181393 AI769834 AK027216 AL137506 BC094792
RefSeq transcript (Entrez)NM_001104558 NM_001297617 NM_001297618 NM_024930
Consensus coding sequences : CCDS (NCBI)ELOVL7
Gene ExpressionELOVL7 [ NCBI-GEO ]   ELOVL7 [ EBI - ARRAY_EXPRESS ]   ELOVL7 [ SEEK ]   ELOVL7 [ MEM ]
Gene Expression Viewer (FireBrowse)ELOVL7 [ Firebrowse - Broad ]
GenevisibleExpression of ELOVL7 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79993
GTEX Portal (Tissue expression)ELOVL7
Human Protein AtlasENSG00000164181-ELOVL7 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA1L3X0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA1L3X0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA1L3X0
PhosPhoSitePlusA1L3X0
Domaine pattern : Prosite (Expaxy)ELO (PS01188)   
Domains : Interpro (EBI)ELO_CS    ELO_fam    ELOVL7   
Domain families : Pfam (Sanger)ELO (PF01151)   
Domain families : Pfam (NCBI)pfam01151   
Conserved Domain (NCBI)ELOVL7
PDB (RSDB)6Y7F   
PDB Europe6Y7F   
PDB (PDBSum)6Y7F   
PDB (IMB)6Y7F   
Structural Biology KnowledgeBase6Y7F   
SCOP (Structural Classification of Proteins)6Y7F   
CATH (Classification of proteins structures)6Y7F   
SuperfamilyA1L3X0
AlphaFold pdb e-kbA1L3X0   
Human Protein Atlas [tissue]ENSG00000164181-ELOVL7 [tissue]
HPRD18700
Protein Interaction databases
DIP (DOE-UCLA)A1L3X0
IntAct (EBI)A1L3X0
BioGRIDELOVL7
STRING (EMBL)ELOVL7
ZODIACELOVL7
Ontologies - Pathways
QuickGOA1L3X0
Ontology : AmiGOprotein binding  endoplasmic reticulum  endoplasmic reticulum membrane  unsaturated fatty acid biosynthetic process  fatty acid elongase activity  fatty acid elongase activity  fatty acid elongation, saturated fatty acid  fatty acid elongation, saturated fatty acid  sphingolipid biosynthetic process  integral component of endoplasmic reticulum membrane  fatty acid elongation, monounsaturated fatty acid  fatty acid elongation, polyunsaturated fatty acid  fatty acid elongation, polyunsaturated fatty acid  long-chain fatty-acyl-CoA biosynthetic process  very long-chain fatty acid biosynthetic process  very long-chain fatty acid biosynthetic process  3-oxo-arachidoyl-CoA synthase activity  3-oxo-cerotoyl-CoA synthase activity  3-oxo-lignoceronyl-CoA synthase activity  very-long-chain 3-ketoacyl-CoA synthase activity  
Ontology : EGO-EBIprotein binding  endoplasmic reticulum  endoplasmic reticulum membrane  unsaturated fatty acid biosynthetic process  fatty acid elongase activity  fatty acid elongase activity  fatty acid elongation, saturated fatty acid  fatty acid elongation, saturated fatty acid  sphingolipid biosynthetic process  integral component of endoplasmic reticulum membrane  fatty acid elongation, monounsaturated fatty acid  fatty acid elongation, polyunsaturated fatty acid  fatty acid elongation, polyunsaturated fatty acid  long-chain fatty-acyl-CoA biosynthetic process  very long-chain fatty acid biosynthetic process  very long-chain fatty acid biosynthetic process  3-oxo-arachidoyl-CoA synthase activity  3-oxo-cerotoyl-CoA synthase activity  3-oxo-lignoceronyl-CoA synthase activity  very-long-chain 3-ketoacyl-CoA synthase activity  
Pathways : KEGGFatty acid elongation   
NDEx NetworkELOVL7
Atlas of Cancer Signalling NetworkELOVL7
Wikipedia pathwaysELOVL7
Orthology - Evolution
OrthoDB79993
GeneTree (enSembl)ENSG00000164181
Phylogenetic Trees/Animal Genes : TreeFamELOVL7
Homologs : HomoloGeneELOVL7
Homology/Alignments : Family Browser (UCSC)ELOVL7
Gene fusions - Rearrangements
Fusion : MitelmanDEPDC1B/ELOVL7 [5q12.1/5q12.1]  
Fusion : MitelmanPDE4D/ELOVL7 [5q11.2/5q12.1]  
Fusion : QuiverELOVL7
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerELOVL7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ELOVL7
dbVarELOVL7
ClinVarELOVL7
MonarchELOVL7
1000_GenomesELOVL7 
Exome Variant ServerELOVL7
GNOMAD BrowserENSG00000164181
Varsome BrowserELOVL7
ACMGELOVL7 variants
VarityA1L3X0
Genomic Variants (DGV)ELOVL7 [DGVbeta]
DECIPHERELOVL7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisELOVL7 
Mutations
ICGC Data PortalELOVL7 
TCGA Data PortalELOVL7 
Broad Tumor PortalELOVL7
OASIS PortalELOVL7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICELOVL7  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DELOVL7
Mutations and Diseases : HGMDELOVL7
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaELOVL7
DgiDB (Drug Gene Interaction Database)ELOVL7
DoCM (Curated mutations)ELOVL7
CIViC (Clinical Interpretations of Variants in Cancer)ELOVL7
Cancer3DELOVL7
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614451   
Orphanet
DisGeNETELOVL7
MedgenELOVL7
Genetic Testing Registry ELOVL7
NextProtA1L3X0 [Medical]
GENETestsELOVL7
Target ValidationELOVL7
Huge Navigator ELOVL7 [HugePedia]
ClinGenELOVL7
Clinical trials, drugs, therapy
MyCancerGenomeELOVL7
Protein Interactions : CTDELOVL7
Pharm GKB GenePA134934034
PharosA1L3X0
Clinical trialELOVL7
Miscellaneous
canSAR (ICR)ELOVL7
HarmonizomeELOVL7
DataMed IndexELOVL7
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXELOVL7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:08:05 CEST 2021

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