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ELOVL7 (ELOVL fatty acid elongase 7)

Identity

Alias_namesELOVL family member 7
Alias_symbol (synonym)FLJ23563
Other alias-
HGNC (Hugo) ELOVL7
LocusID (NCBI) 79993
Atlas_Id 51307
Location 5q12.1  [Link to chromosome band 5q12]
Location_base_pair Starts at 60751789 and ends at 60844274 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
DEPDC1B (5q12.1) / ELOVL7 (5q12.1)ELOVL7 (5q12.1) / DSE (6q22.1)ELOVL7 (5q12.1) / ELOVL7 (5q12.1)
PAFAH1B1 (17p13.3) / ELOVL7 (5q12.1)PDE4D (5q11.2) / ELOVL7 (5q12.1)PDE4D 5q11.2 / ELOVL7 5q12.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ELOVL7   26292
Cards
Entrez_Gene (NCBI)ELOVL7  79993  ELOVL fatty acid elongase 7
Aliases
GeneCards (Weizmann)ELOVL7
Ensembl hg19 (Hinxton)ENSG00000164181 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164181 [Gene_View]  chr5:60751789-60844274 [Contig_View]  ELOVL7 [Vega]
ICGC DataPortalENSG00000164181
TCGA cBioPortalELOVL7
AceView (NCBI)ELOVL7
Genatlas (Paris)ELOVL7
WikiGenes79993
SOURCE (Princeton)ELOVL7
Genetics Home Reference (NIH)ELOVL7
Genomic and cartography
GoldenPath hg38 (UCSC)ELOVL7  -     chr5:60751789-60844274 -  5q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ELOVL7  -     5q12.1   [Description]    (hg19-Feb_2009)
EnsemblELOVL7 - 5q12.1 [CytoView hg19]  ELOVL7 - 5q12.1 [CytoView hg38]
Mapping of homologs : NCBIELOVL7 [Mapview hg19]  ELOVL7 [Mapview hg38]
OMIM614451   
Gene and transcription
Genbank (Entrez)AB181393 AI769834 AK027216 AL137506 BC094792
RefSeq transcript (Entrez)NM_001104558 NM_001297617 NM_001297618 NM_024930
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ELOVL7
Cluster EST : UnigeneHs.274256 [ NCBI ]
CGAP (NCI)Hs.274256
Alternative Splicing GalleryENSG00000164181
Gene ExpressionELOVL7 [ NCBI-GEO ]   ELOVL7 [ EBI - ARRAY_EXPRESS ]   ELOVL7 [ SEEK ]   ELOVL7 [ MEM ]
Gene Expression Viewer (FireBrowse)ELOVL7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79993
GTEX Portal (Tissue expression)ELOVL7
Protein : pattern, domain, 3D structure
UniProt/SwissProtA1L3X0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA1L3X0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA1L3X0
Splice isoforms : SwissVarA1L3X0
PhosPhoSitePlusA1L3X0
Domaine pattern : Prosite (Expaxy)ELO (PS01188)   
Domains : Interpro (EBI)ELO_CS    ELO_fam    ELOVL7   
Domain families : Pfam (Sanger)ELO (PF01151)   
Domain families : Pfam (NCBI)pfam01151   
Conserved Domain (NCBI)ELOVL7
DMDM Disease mutations79993
Blocks (Seattle)ELOVL7
SuperfamilyA1L3X0
Human Protein AtlasENSG00000164181
Peptide AtlasA1L3X0
HPRD18700
IPIIPI00783761   IPI00965998   IPI00963842   IPI00967453   IPI00965790   
Protein Interaction databases
DIP (DOE-UCLA)A1L3X0
IntAct (EBI)A1L3X0
FunCoupENSG00000164181
BioGRIDELOVL7
STRING (EMBL)ELOVL7
ZODIACELOVL7
Ontologies - Pathways
QuickGOA1L3X0
Ontology : AmiGOprotein binding  endoplasmic reticulum  endoplasmic reticulum membrane  fatty acid elongase activity  fatty acid elongase activity  integral component of membrane  fatty acid elongation, saturated fatty acid  fatty acid elongation, polyunsaturated fatty acid  long-chain fatty-acyl-CoA biosynthetic process  very long-chain fatty acid biosynthetic process  3-oxo-arachidoyl-CoA synthase activity  3-oxo-cerotoyl-CoA synthase activity  3-oxo-lignoceronyl-CoA synthase activity  
Ontology : EGO-EBIprotein binding  endoplasmic reticulum  endoplasmic reticulum membrane  fatty acid elongase activity  fatty acid elongase activity  integral component of membrane  fatty acid elongation, saturated fatty acid  fatty acid elongation, polyunsaturated fatty acid  long-chain fatty-acyl-CoA biosynthetic process  very long-chain fatty acid biosynthetic process  3-oxo-arachidoyl-CoA synthase activity  3-oxo-cerotoyl-CoA synthase activity  3-oxo-lignoceronyl-CoA synthase agtivivy,/A>  
Pathways : KEGGFatty acid elongation   
NDEx NetworkELOVL7
Atlas of Cancer Signalling NetworkELOVL7
Wikipedia pathwaysELOVL7
Orthology - Evolution
OrthoDB79993
GeneTree (enSembl)ENSG00000164181
Phylogenetic Trees/Animal Genes : TreeFamELOVL7
HOVERGENA1L3X0
HOGENOMA1L3X0
Homologs : HomoloGeneELOVL7
Homology/Alignments : Family Browser (UCSC)ELOVL7
Gene fusions - Rearrangements
Fusion : MitelmanDEPDC1B/ELOVL7 [5q12.1/5q12.1]  [t(5;5)(q12;q12)]  
Fusion : MitelmanPDE4D/ELOVL7 [5q11.2/5q12.1]  [t(5;5)(q12;q12)]  
Fusion: TCGAPDE4D 5q11.2 ELOVL7 5q12.1 LUAD PRAD
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerELOVL7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ELOVL7
dbVarELOVL7
ClinVarELOVL7
1000_GenomesELOVL7 
Exome Variant ServerELOVL7
ExAC (Exome Aggregation Consortium)ELOVL7 (select the gene name)
Genetic variants : HAPMAP79993
Genomic Variants (DGV)ELOVL7 [DGVbeta]
DECIPHERELOVL7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisELOVL7 
Mutations
ICGC Data PortalELOVL7 
TCGA Data PortalELOVL7 
Broad Tumor PortalELOVL7
OASIS PortalELOVL7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICELOVL7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDELOVL7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ELOVL7
DgiDB (Drug Gene Interaction Database)ELOVL7
DoCM (Curated mutations)ELOVL7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ELOVL7 (select a term)
intoGenELOVL7
Cancer3DELOVL7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614451   
Orphanet
MedgenELOVL7
Genetic Testing Registry ELOVL7
NextProtA1L3X0 [Medical]
TSGene79993
GENETestsELOVL7
Target ValidationELOVL7
Huge Navigator ELOVL7 [HugePedia]
snp3D : Map Gene to Disease79993
BioCentury BCIQELOVL7
ClinGenELOVL7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79993
Chemical/Pharm GKB GenePA134934034
Clinical trialELOVL7
Miscellaneous
canSAR (ICR)ELOVL7 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineELOVL7
EVEXELOVL7
GoPubMedELOVL7
iHOPELOVL7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:52:32 CEST 2017

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