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ELP5 (elongator acetyltransferase complex subunit 5)

Identity

Alias_namesC17orf81
chromosome 17 open reading frame 81
Alias_symbol (synonym)DERP6
Other aliasHSPC002
MST071
MSTP071
HGNC (Hugo) ELP5
LocusID (NCBI) 23587
Atlas_Id 53111
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 7155520 and ends at 7163259 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ELP5   30617
Cards
Entrez_Gene (NCBI)ELP5  23587  elongator acetyltransferase complex subunit 5
AliasesC17orf81; DERP6; HSPC002; MST071; 
MSTP071
GeneCards (Weizmann)ELP5
Ensembl hg19 (Hinxton)ENSG00000170291 [Gene_View]  chr17:7155520-7163259 [Contig_View]  ELP5 [Vega]
Ensembl hg38 (Hinxton)ENSG00000170291 [Gene_View]  chr17:7155520-7163259 [Contig_View]  ELP5 [Vega]
ICGC DataPortalENSG00000170291
TCGA cBioPortalELP5
AceView (NCBI)ELP5
Genatlas (Paris)ELP5
WikiGenes23587
SOURCE (Princeton)ELP5
Genetics Home Reference (NIH)ELP5
Genomic and cartography
GoldenPath hg19 (UCSC)ELP5  -     chr17:7155520-7163259 +  17p13.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ELP5  -     17p13.1   [Description]    (hg38-Dec_2013)
EnsemblELP5 - 17p13.1 [CytoView hg19]  ELP5 - 17p13.1 [CytoView hg38]
Mapping of homologs : NCBIELP5 [Mapview hg19]  ELP5 [Mapview hg38]
OMIM615019   
Gene and transcription
Genbank (Entrez)AB013910 AF070658 AF087868 AF163262 AK225983
RefSeq transcript (Entrez)NM_015362 NM_203413 NM_203414 NM_203415
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010718 NW_004929405
Consensus coding sequences : CCDS (NCBI)ELP5
Cluster EST : UnigeneHs.417029 [ NCBI ]
CGAP (NCI)Hs.417029
Alternative Splicing GalleryENSG00000170291
Gene ExpressionELP5 [ NCBI-GEO ]   ELP5 [ EBI - ARRAY_EXPRESS ]   ELP5 [ SEEK ]   ELP5 [ MEM ]
Gene Expression Viewer (FireBrowse)ELP5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23587
GTEX Portal (Tissue expression)ELP5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TE02   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TE02  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TE02
Splice isoforms : SwissVarQ8TE02
PhosPhoSitePlusQ8TE02
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ELP5
DMDM Disease mutations23587
Blocks (Seattle)ELP5
SuperfamilyQ8TE02
Human Protein AtlasENSG00000170291
Peptide AtlasQ8TE02
HPRD08520
IPIIPI00328185   IPI00402148   IPI00383650   IPI00829707   IPI00877109   
Protein Interaction databases
DIP (DOE-UCLA)Q8TE02
IntAct (EBI)Q8TE02
FunCoupENSG00000170291
BioGRIDELP5
STRING (EMBL)ELP5
ZODIACELP5
Ontologies - Pathways
QuickGOQ8TE02
Ontology : AmiGOprotein binding  nucleus  cytoplasm  transcription, DNA-templated  regulation of transcription, DNA-templated  positive regulation of cell migration  Elongator holoenzyme complex  
Ontology : EGO-EBIprotein binding  nucleus  cytoplasm  transcription, DNA-templated  regulation of transcription, DNA-templated  positive regulation of cell migration  Elongator holoenzyme complex  
NDEx NetworkELP5
Atlas of Cancer Signalling NetworkELP5
Wikipedia pathwaysELP5
Orthology - Evolution
OrthoDB23587
GeneTree (enSembl)ENSG00000170291
Phylogenetic Trees/Animal Genes : TreeFamELP5
HOVERGENQ8TE02
HOGENOMQ8TE02
Homologs : HomoloGeneELP5
Homology/Alignments : Family Browser (UCSC)ELP5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerELP5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ELP5
dbVarELP5
ClinVarELP5
1000_GenomesELP5 
Exome Variant ServerELP5
ExAC (Exome Aggregation Consortium)ELP5 (select the gene name)
Genetic variants : HAPMAP23587
Genomic Variants (DGV)ELP5 [DGVbeta]
DECIPHER (Syndromes)17:7155520-7163259  ENSG00000170291
CONAN: Copy Number AnalysisELP5 
Mutations
ICGC Data PortalELP5 
TCGA Data PortalELP5 
Broad Tumor PortalELP5
OASIS PortalELP5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICELP5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDELP5
BioMutasearch ELP5
DgiDB (Drug Gene Interaction Database)ELP5
DoCM (Curated mutations)ELP5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ELP5 (select a term)
intoGenELP5
Cancer3DELP5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615019   
Orphanet
MedgenELP5
Genetic Testing Registry ELP5
NextProtQ8TE02 [Medical]
TSGene23587
GENETestsELP5
Huge Navigator ELP5 [HugePedia]
snp3D : Map Gene to Disease23587
BioCentury BCIQELP5
ClinGenELP5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23587
Chemical/Pharm GKB GenePA143485405
Clinical trialELP5
Miscellaneous
canSAR (ICR)ELP5 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineELP5
EVEXELP5
GoPubMedELP5
iHOPELP5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:00:03 CEST 2017

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