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EMBP1 (embigin pseudogene 1)

Identity

Other alias-
HGNC (Hugo) EMBP1
LocusID (NCBI) 647121
Atlas_Id 62809
Location 1p11.2  [Link to chromosome band 1p11]
Location_base_pair Starts at 121519112 and ends at 121571888 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EMBP1   38661
Cards
Entrez_Gene (NCBI)EMBP1  647121  embigin pseudogene 1
Aliases
GeneCards (Weizmann)EMBP1
Ensembl hg19 (Hinxton)ENSG00000231752 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231752 [Gene_View]  chr1:121519112-121571888 [Contig_View]  EMBP1 [Vega]
ICGC DataPortalENSG00000231752
TCGA cBioPortalEMBP1
AceView (NCBI)EMBP1
Genatlas (Paris)EMBP1
WikiGenes647121
SOURCE (Princeton)EMBP1
Genetics Home Reference (NIH)EMBP1
Genomic and cartography
GoldenPath hg38 (UCSC)EMBP1  -     chr1:121519112-121571888 +  1p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EMBP1  -     1p11.2   [Description]    (hg19-Feb_2009)
EnsemblEMBP1 - 1p11.2 [CytoView hg19]  EMBP1 - 1p11.2 [CytoView hg38]
Mapping of homologs : NCBIEMBP1 [Mapview hg19]  EMBP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128714
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EMBP1
Cluster EST : UnigeneHs.697682 [ NCBI ]
CGAP (NCI)Hs.697682
Alternative Splicing GalleryENSG00000231752
Gene ExpressionEMBP1 [ NCBI-GEO ]   EMBP1 [ EBI - ARRAY_EXPRESS ]   EMBP1 [ SEEK ]   EMBP1 [ MEM ]
Gene Expression Viewer (FireBrowse)EMBP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)647121
GTEX Portal (Tissue expression)EMBP1
Human Protein AtlasENSG00000231752-EMBP1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EMBP1
DMDM Disease mutations647121
Blocks (Seattle)EMBP1
Human Protein Atlas [tissue]ENSG00000231752-EMBP1 [tissue]
Protein Interaction databases
FunCoupENSG00000231752
BioGRIDEMBP1
STRING (EMBL)EMBP1
ZODIACEMBP1
Ontologies - Pathways
Huge Navigator EMBP1 [HugePedia]
snp3D : Map Gene to Disease647121
BioCentury BCIQEMBP1
ClinGenEMBP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD647121
Clinical trialEMBP1
Miscellaneous
canSAR (ICR)EMBP1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEMBP1
EVEXEMBP1
GoPubMedEMBP1
iHOPEMBP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 12:59:58 CET 2017

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