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EML6 (echinoderm microtubule associated protein like 6)

Identity

Alias_symbol (synonym)FLJ42562
Other alias-
HGNC (Hugo) EML6
LocusID (NCBI) 400954
Atlas_Id 62824
Location 2p16.2  [Link to chromosome band 2p16]
Location_base_pair Starts at 54952149 and ends at 55199156 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EML6   35412
Cards
Entrez_Gene (NCBI)EML6  400954  echinoderm microtubule associated protein like 6
Aliases
GeneCards (Weizmann)EML6
Ensembl hg19 (Hinxton)ENSG00000214595 [Gene_View]  chr2:54952149-55199156 [Contig_View]  EML6 [Vega]
Ensembl hg38 (Hinxton)ENSG00000214595 [Gene_View]  chr2:54952149-55199156 [Contig_View]  EML6 [Vega]
ICGC DataPortalENSG00000214595
TCGA cBioPortalEML6
AceView (NCBI)EML6
Genatlas (Paris)EML6
WikiGenes400954
SOURCE (Princeton)EML6
Genetics Home Reference (NIH)EML6
Genomic and cartography
GoldenPath hg19 (UCSC)EML6  -     chr2:54952149-55199156 +  2p16.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)EML6  -     2p16.2   [Description]    (hg38-Dec_2013)
EnsemblEML6 - 2p16.2 [CytoView hg19]  EML6 - 2p16.2 [CytoView hg38]
Mapping of homologs : NCBIEML6 [Mapview hg19]  EML6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK026400 AK124553 AK131467 BX647078
RefSeq transcript (Entrez)NM_001039753
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_022184 NW_004929300
Consensus coding sequences : CCDS (NCBI)EML6
Cluster EST : UnigeneHs.656692 [ NCBI ]
CGAP (NCI)Hs.656692
Alternative Splicing GalleryENSG00000214595
Gene ExpressionEML6 [ NCBI-GEO ]   EML6 [ EBI - ARRAY_EXPRESS ]   EML6 [ SEEK ]   EML6 [ MEM ]
Gene Expression Viewer (FireBrowse)EML6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)400954
GTEX Portal (Tissue expression)EML6
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZMW3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZMW3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZMW3
Splice isoforms : SwissVarQ6ZMW3
PhosPhoSitePlusQ6ZMW3
Domaine pattern : Prosite (Expaxy)WD_REPEATS_1 (PS00678)    WD_REPEATS_2 (PS50082)    WD_REPEATS_REGION (PS50294)   
Domains : Interpro (EBI)Haem_d1    HELP    Quinonprotein_ADH-like_supfam    WD40/YVTN_repeat-like_dom    WD40_repeat    WD40_repeat_CS    WD40_repeat_dom   
Domain families : Pfam (Sanger)HELP (PF03451)    WD40 (PF00400)   
Domain families : Pfam (NCBI)pfam03451    pfam00400   
Domain families : Smart (EMBL)WD40 (SM00320)  
Conserved Domain (NCBI)EML6
DMDM Disease mutations400954
Blocks (Seattle)EML6
SuperfamilyQ6ZMW3
Human Protein AtlasENSG00000214595
Peptide AtlasQ6ZMW3
IPIIPI00895879   IPI00847255   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZMW3
IntAct (EBI)Q6ZMW3
FunCoupENSG00000214595
BioGRIDEML6
STRING (EMBL)EML6
ZODIACEML6
Ontologies - Pathways
QuickGOQ6ZMW3
Ontology : AmiGOcytoplasm  microtubule  
Ontology : EGO-EBIcytoplasm  microtubule  
NDEx NetworkEML6
Atlas of Cancer Signalling NetworkEML6
Wikipedia pathwaysEML6
Orthology - Evolution
OrthoDB400954
GeneTree (enSembl)ENSG00000214595
Phylogenetic Trees/Animal Genes : TreeFamEML6
HOVERGENQ6ZMW3
HOGENOMQ6ZMW3
Homologs : HomoloGeneEML6
Homology/Alignments : Family Browser (UCSC)EML6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEML6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EML6
dbVarEML6
ClinVarEML6
1000_GenomesEML6 
Exome Variant ServerEML6
ExAC (Exome Aggregation Consortium)EML6 (select the gene name)
Genetic variants : HAPMAP400954
Genomic Variants (DGV)EML6 [DGVbeta]
DECIPHER (Syndromes)2:54952149-55199156  ENSG00000214595
CONAN: Copy Number AnalysisEML6 
Mutations
ICGC Data PortalEML6 
TCGA Data PortalEML6 
Broad Tumor PortalEML6
OASIS PortalEML6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICEML6  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDEML6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch EML6
DgiDB (Drug Gene Interaction Database)EML6
DoCM (Curated mutations)EML6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EML6 (select a term)
intoGenEML6
Cancer3DEML6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenEML6
Genetic Testing Registry EML6
NextProtQ6ZMW3 [Medical]
TSGene400954
GENETestsEML6
Huge Navigator EML6 [HugePedia]
snp3D : Map Gene to Disease400954
BioCentury BCIQEML6
ClinGenEML6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400954
Chemical/Pharm GKB GenePA164719036
Clinical trialEML6
Miscellaneous
canSAR (ICR)EML6 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEML6
EVEXEML6
GoPubMedEML6
iHOPEML6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:02:52 CET 2017

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